RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 DGCR6LQ9BY27 220 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 TRIM8Q9BZR9 551 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 ACTL8Q9H568 366 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 SELENONQ9NZV5 590 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 IL17CQ9P0M4 197 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 KLQ9UEF7 1012 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 ZMYM5Q9UJ78 669 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 CRLS1Q9UJA2 301 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 ZNF225Q9UK10 706 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 ZNF490Q9ULM2 529 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 KIAA1549LQ6ZVL6 1849 aa8.36□□□□□ -1.07
CTNNA1-223ENST00000520520 CHD5Q8TDI0 1954 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 TRBV5-3A0A0A0MS03 114 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 A0A0D9SEW6 157 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 A0A1B0GTL3 188 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 ISPDA4D126 451 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 K7EQS6 105 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 LEFTY2O00292 366 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 RGS10O43665 173 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 KDM1AO60341 852 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 FAM20BO75063 409 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 CNOT3O75175 753 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 BCAS1O75363 584 aaPredicted RBP8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 STK16O75716 305 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 MYO1DO94832 1006 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 KLF8O95600 359 aaPredicted RBP8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 NFATC1O95644 943 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 TBX18O95935 607 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 SERPINA1P01009 418 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 CFIP05156 583 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 FABP3P05413 133 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 UGT2B4P06133 528 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 C8GP07360 202 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 PRSS56P0CW18 603 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 PCNAP12004 261 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 JUNDP17535 347 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 FPR1P21462 350 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 CORO1AP31146 461 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 DNAJA1P31689 397 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 SPAM1P38567 509 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 MAGEA2P43356 314 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 SLC6A11P48066 632 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 TRPC1P48995 793 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 HNMTP50135 292 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 TRIM61Q5EBN2 209 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 SPANXN4Q5MJ08 99 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 CAPN13Q6MZZ7 669 aaPredicted RBP8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 RETSATQ6NUM9 610 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 TUBA3EQ6PEY2 450 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 TBPL2Q6SJ96 375 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 ENPP6Q6UWR7 440 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 DNAJC14Q6Y2X3 702 aaPredicted RBP8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 SERPINA11Q86U17 422 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 SLCO6A1Q86UG4 719 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 IGFN1Q86VF2 1251 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 SERPINA9Q86WD7 417 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 CALHM3Q86XJ0 350 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 PLD3Q8IV08 490 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 ZDHHC21Q8IVQ6 265 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 CFAP52Q8N1V2 620 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 DCAF4L2Q8NA75 395 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 MCOLN3Q8TDD5 553 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 FBLIM1Q8WUP2 373 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 USP7Q93009 1102 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 TAMM41Q96BW9 452 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 CMTM7Q96FZ5 175 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 EXOC2Q96KP1 924 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 CDK15Q96Q40 435 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 SCNM1Q9BWG6 230 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 GTPBP2Q9BX10 602 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 MROQ9BYG7 248 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 NAA50Q9GZZ1 169 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 ELOVL6Q9H5J4 265 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 SOX17Q9H6I2 414 aaPredicted RBP8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 CCSER2Q9H7U1 834 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 KAT8Q9H7Z6 458 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 REEP1Q9H902 201 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 FBXO8Q9NRD0 319 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 LATS2Q9NRM7 1088 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 TRPM5Q9NZQ8 1165 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 VAPAQ9P0L0 249 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 SLAMF8Q9P0V8 285 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 SCHIP1Q9P0W5 487 aaPredicted RBP8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 LHX3Q9UBR4 397 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 ENOPH1Q9UHY7 261 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 TDRKHQ9Y2W6 561 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 PCDHGA8Q9Y5G5 932 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 GMPPBQ9Y5P6 360 aa8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 ZFC3H1O60293 1989 aaKnown RBP8.35□□□□□ -1.07
CTNNA1-223ENST00000520520 GLYATL1P3A0A0U1RQE8 302 aa8.34□□□□□ -1.07
CTNNA1-223ENST00000520520 SPAARA0A1B0GVQ0 90 aa8.34□□□□□ -1.07
CTNNA1-223ENST00000520520 A0A1W2PQ67 120 aa8.34□□□□□ -1.07
CTNNA1-223ENST00000520520 TCRBV21S2A2A0A5A6 115 aa8.34□□□□□ -1.07
CTNNA1-223ENST00000520520 SERTM1A2A2V5 107 aa8.34□□□□□ -1.07
CTNNA1-223ENST00000520520 NPIPB8E9PQR5 432 aa8.34□□□□□ -1.07
CTNNA1-223ENST00000520520 BOLA2-SMG1P6H3BVE0 249 aa8.34□□□□□ -1.07
CTNNA1-223ENST00000520520 CDX4O14627 284 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-223ENST00000520520 AREL1O15033 823 aa8.34□□□□□ -1.07
CTNNA1-223ENST00000520520 KPNA5O15131 536 aa8.34□□□□□ -1.07
CTNNA1-223ENST00000520520 SLC16A5O15375 505 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms