RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 CRYBG2Q8N1P7 616 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 KBTBD3Q8NAB2 608 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 NOA1Q8NC60 698 aaKnown RBP3.72□□□□□ -1.81
SQLE-204ENST00000520493 OR4K1Q8NGD4 311 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 FBXO30Q8TB52 745 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 HSD17B8Q92506 261 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 N4BP2L2Q92802 583 aaPredicted RBP3.72□□□□□ -1.81
SQLE-204ENST00000520493 MRPL38Q96DV4 380 aaKnown RBP3.72□□□□□ -1.81
SQLE-204ENST00000520493 PGM2Q96G03 612 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 FAM71F1Q96KD3 344 aaPredicted RBP3.72□□□□□ -1.81
SQLE-204ENST00000520493 ZNF560Q96MR9 790 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 TEX13AQ9BXU3 409 aaPredicted RBP3.72□□□□□ -1.81
SQLE-204ENST00000520493 PRRG4Q9BZD6 226 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 NT5C3AQ9H0P0 336 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 CSTL1Q9H114 145 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 NAPBQ9H115 298 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 TMEM245Q9H330 911 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 SNX25Q9H3E2 840 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 ZFP57Q9NU63 452 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 SPASTQ9UBP0 616 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 EXTL2Q9UBQ6 330 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 KCNN3Q9UGI6 736 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 SLC7A7Q9UM01 511 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 JRKLQ9Y4A0 524 aa3.72□□□□□ -1.81
SQLE-204ENST00000520493 FAM205AQ6ZU69 1335 aa3.71□□□□□ -1.81
SQLE-204ENST00000520493 IGLV5-45A0A087WSX0 123 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 ARHGAP42A6NI28 874 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 TMEM150CB9EJG8 249 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 NTN3O00634 580 aaPredicted RBP3.71□□□□□ -1.82
SQLE-204ENST00000520493 ARPC2O15144 300 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 SSX5O60225 188 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 PRAF2O60831 178 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 PEX11AO75192 247 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 PRKRAO75569 313 aaKnown RBP3.71□□□□□ -1.82
SQLE-204ENST00000520493 PIGNO95427 931 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 GSRP00390 522 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 MT-ATP6P00846 226 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 PRSS1P07477 247 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 SBK2P0C263 348 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 ANKRD34CP0C6C1 535 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 CYP2A7P20853 494 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 PIK3R1P27986 724 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 CDKN1AP38936 164 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 VAMP7P51809 220 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 DVL1P1P54792 670 aaPredicted RBP3.71□□□□□ -1.82
SQLE-204ENST00000520493 MAZP56270 477 aaKnown RBP3.71□□□□□ -1.82
SQLE-204ENST00000520493 GSDMDP57764 484 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 KRTAP10-12P60413 245 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 HERV-K104P61576 105 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 AKAP17AQ02040 695 aaKnown RBP3.71□□□□□ -1.82
SQLE-204ENST00000520493 RBBP7Q16576 425 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 UGP2Q16851 508 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 ITPRIPL2Q3MIP1 535 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 TEX35Q5T0J7 233 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 C1orf186Q6ZWK4 172 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 ANKRD33Q7Z3H0 272 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 PPP1R42Q7Z4L9 355 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 NFE4Q86UQ8 179 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 MEX3DQ86XN8 651 aaKnown RBP3.71□□□□□ -1.82
SQLE-204ENST00000520493 AQP12AQ8IXF9 295 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 TBC1D21Q8IYX1 336 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 CLEC1AQ8NC01 280 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 GMCL1P1Q8NEA9 526 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 IPMKQ8NFU5 416 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 OR2T12Q8NG77 320 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 OR52E1Q8NGJ3 308 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 ZNF606Q8WXB4 792 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 THOC1Q96FV9 657 aaKnown RBP3.71□□□□□ -1.82
SQLE-204ENST00000520493 RBM18Q96H35 190 aaKnown RBP3.71□□□□□ -1.82
SQLE-204ENST00000520493 SAMD8Q96LT4 415 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 NSMCE2Q96MF7 247 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 GDAP1L1Q96MZ0 367 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 IWS1Q96ST2 819 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 C17orf62Q9BQA9 187 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 RTP3Q9BQQ7 232 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 FAM213AQ9BRX8 229 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 POLR3CQ9BUI4 534 aaPredicted RBP3.71□□□□□ -1.82
SQLE-204ENST00000520493 SLC2A11Q9BYW1 496 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 ZMYND12Q9H0C1 365 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 UBQLN3Q9H347 655 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 FGF21Q9NSA1 209 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 SLC38A7Q9NVC3 462 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 PKD2L2Q9NZM6 624 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 TAAR2Q9P1P5 351 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 UBQLN2Q9UHD9 624 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 FOXA2Q9Y261 457 aaPredicted RBP3.71□□□□□ -1.82
SQLE-204ENST00000520493 WDR81Q562E7 1941 aa3.71□□□□□ -1.82
SQLE-204ENST00000520493 NOTCH3Q9UM47 2321 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 CFAP73A6NFT4 308 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 C2orf81A6NN90 581 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 NPIPA3F8WFD2 350 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 HSF2BPO75031 334 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 TGFAP01135 160 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 SERPINB2P05120 415 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 SERPING1P05155 500 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 CA6P23280 308 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 RPA1P27694 616 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 PRPHP41219 470 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 MBTD1Q05BQ5 628 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 CCDC40Q4G0X9 1142 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms