RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, human

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD1-205	ENST00000519623	NAT9	Q9BTE0	207 aa		11.75	□□□□□ -0.53
CSMD1-205	ENST00000519623	SARG	Q9BW04	601 aa		11.75	□□□□□ -0.53
CSMD1-205	ENST00000519623	HCN3	Q9P1Z3	774 aa		11.75	□□□□□ -0.53
CSMD1-205	ENST00000519623	SLC17A6	Q9P2U8	582 aa		11.75	□□□□□ -0.53
CSMD1-205	ENST00000519623	SLC22A7	Q9Y694	548 aa		11.75	□□□□□ -0.53
CSMD1-205	ENST00000519623	MYO9A	B2RTY4	2548 aa		11.75	□□□□□ -0.53
CSMD1-205	ENST00000519623	DNAJB6	O75190	326 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	SEC24D	O94855	1032 aa	Predicted RBP	11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	HIST1H2AD	P20671	130 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	CCND1	P24385	295 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	IL2	P60568	153 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	AP2B1	P63010	937 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	BBS9	Q3SYG4	887 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	MINDY4	Q4G0A6	757 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	ABHD17B	Q5VST6	288 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	DUPD1	Q68J44	220 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	PLAG1	Q6DJT9	500 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	HIBCH	Q6NVY1	386 aa	Predicted RBP	11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	ANKRD37	Q7Z713	158 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	ASPG	Q86U10	573 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	AFAP1L2	Q8N4X5	818 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	PLPP5	Q8NEB5	264 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	OR56A3	Q8NH54	315 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	GABPB2	Q8TAK5	448 aa	Predicted RBP	11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	NR4A3	Q92570	626 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	ALKBH8	Q96BT7	664 aa	Known RBP	11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	PYCR2	Q96C36	320 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	MOCOS	Q96EN8	888 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	CERS2	Q96G23	380 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	SNF8	Q96H20	258 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	HIST1H2AH	Q96KK5	128 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	MAGEB10	Q96LZ2	347 aa	Predicted RBP	11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	PWWP2A	Q96N64	755 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	OR4K3	Q96R72	315 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	HIST1H2AJ	Q99878	128 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	H2AFJ	Q9BTM1	129 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	FAM129A	Q9BZQ8	928 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	ANKH	Q9HCJ1	492 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	ASIC3	Q9UHC3	531 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	IKZF3	Q9UKT9	509 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	VWA7	Q9Y334	891 aa		11.74	□□□□□ -0.53
CSMD1-205	ENST00000519623	OR5H15	A6NDH6	313 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623		A8MUI8	341 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	RDH16	O75452	317 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	WISP2	O76076	250 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	MST1	P26927	711 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	GRK3	P35626	688 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	ELK3	P41970	407 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	CCR8	P51685	355 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	KCNK10	P57789	538 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	MEF2A	Q02078	507 aa	Predicted RBP	11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	RHAG	Q02094	409 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	SRSF11	Q05519	484 aa	Known RBP	11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	ZRSR2	Q15696	482 aa	Known RBP	11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	INA	Q16352	499 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	BTBD16	Q32M84	506 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	HECTD2	Q5U5R9	776 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	TRMT10B	Q6PF06	316 aa	Known RBP	11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	ZNF740	Q8NDX6	193 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	DNAJB8	Q8NHS0	232 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	ZCCHC10	Q8TBK6	192 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	RELT	Q969Z4	430 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	FBXL8	Q96CD0	374 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	PDLIM5	Q96HC4	596 aa	Known RBP	11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	OLFM1	Q99784	485 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	WDR83	Q9BRX9	315 aa	Known RBP	11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	HAUS8	Q9BT25	410 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	LANCL2	Q9NS86	450 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	ARL15	Q9NXU5	204 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	NAALAD2	Q9Y3Q0	740 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	TEX264	Q9Y6I9	313 aa		11.73	□□□□□ -0.53
CSMD1-205	ENST00000519623	PCNX1	Q96RV3	2341 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623		A0A1B0GUH1	482 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	ZSCAN12	O43309	604 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	OR1F1	O43749	312 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	PRAMEF2	O60811	474 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	ZG16	O60844	167 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	IL10	P22301	178 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	AGTR2	P50052	363 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	AP1S2	P56377	157 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	PER3	P56645	1201 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	ZNF33B	Q06732	778 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	PDAP1	Q13442	181 aa	Known RBP	11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	PWP1	Q13610	501 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	ACER2	Q5QJU3	275 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	CATSPERE	Q5SY80	951 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	MFSD4B	Q5TF39	518 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	STEAP4	Q687X5	459 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	FCRLB	Q6BAA4	426 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	TMEM207	Q6UWW9	146 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	STRA8	Q7Z7C7	330 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	PDIK1L	Q8N165	341 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	GPATCH11	Q8N954	259 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	OR5T3	Q8NGG3	340 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	M1AP	Q8TC57	530 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	PEX11G	Q96HA9	241 aa		11.72	□□□□□ -0.53
CSMD1-205	ENST00000519623	ZNF354B	Q96LW1	612 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms