RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 VPS39Q96JC1 886 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 HAUS8Q9BT25 410 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 LRRC1Q9BTT6 524 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 CRB3Q9BUF7 120 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 DRC3Q9H069 523 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 CAB39LQ9H9S4 337 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 LRRC4CQ9HCJ2 640 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 MKKSQ9NPJ1 570 aaPredicted RBP8.86□□□□□ -0.99
HDAC3-215ENST00000519474 NSMCE4AQ9NXX6 385 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 G3BP2Q9UN86 482 aaKnown RBP8.86□□□□□ -0.99
HDAC3-215ENST00000519474 SLC22A14Q9Y267 594 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 UTP11Q9Y3A2 253 aaKnown RBP8.86□□□□□ -0.99
HDAC3-215ENST00000519474 SCN3AQ9NY46 2000 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 DOCK10Q96BY6 2186 aa8.86□□□□□ -0.99
HDAC3-215ENST00000519474 A0A1W2PQ72 361 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 TCRBV9S1A1TA0A576 114 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 CTAGE15A4D2H0 777 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 CLEC18AA5D8T8 446 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 OR2W5A6NFC9 320 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 H0YIG0 161 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 TAPBPO15533 448 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 PRPF4O43172 522 aaKnown RBP eCLIP8.85□□□□□ -0.99
HDAC3-215ENST00000519474 OR1F1O43749 312 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 KLHL41O60662 606 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 JRKO75564 520 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 FAM155BO75949 473 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 NSA2O95478 260 aaKnown RBP8.85□□□□□ -0.99
HDAC3-215ENST00000519474 ANXA5P08758 320 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 GSTA2P09210 222 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 SMIM10L1P0DMW3 83 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 ITGA3P26006 1051 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 GDF5P43026 501 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 AVPR1BP47901 424 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 CCR8P51685 355 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 CDKL1Q00532 357 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 POU4F1Q01851 419 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 CAV1Q03135 178 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 CSHL1Q14406 222 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 TSNQ15631 228 aaKnown RBP8.85□□□□□ -0.99
HDAC3-215ENST00000519474 TUBB8Q3ZCM7 444 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 FAAH2Q6GMR7 532 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 TMEM205Q6UW68 189 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 CLEC18BQ6UXF7 455 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 Q6ZS92 163 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 ZNF771Q7L3S4 317 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-215ENST00000519474 NDUFAF7Q7L592 441 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 ASPGQ86U10 573 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 CTAGE6Q86UF2 777 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 THOC6Q86W42 341 aaKnown RBP8.85□□□□□ -0.99
HDAC3-215ENST00000519474 ZC3H7AQ8IWR0 971 aaKnown RBP8.85□□□□□ -0.99
HDAC3-215ENST00000519474 CAMKVQ8NCB2 501 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 CLEC18CQ8NCF0 446 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 OR51Q1Q8NH59 317 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 CPT1CQ8TCG5 803 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 ATL1Q8WXF7 558 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 NEIL2Q969S2 332 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 PNPLA2Q96AD5 504 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 RHBDF1Q96CC6 855 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 C19orf60Q96EN9 201 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 SMIM10Q96HG1 83 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 THOC3Q96J01 351 aaKnown RBP8.85□□□□□ -0.99
HDAC3-215ENST00000519474 IMMP1LQ96LU5 166 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 LMF1Q96S06 567 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 CYTH2Q99418 400 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 CPNE1Q99829 537 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 UNKQ9C0B0 810 aaKnown RBP8.85□□□□□ -0.99
HDAC3-215ENST00000519474 DERL2Q9GZP9 239 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 SPNS1Q9H2V7 528 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 POPDC3Q9HBV1 291 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 GPAMQ9HCL2 828 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 SLAMF7Q9NQ25 335 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 LUZP4Q9P127 313 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 CTNNAL1Q9UBT7 734 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 ZNF232Q9UNY5 417 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 OARD1Q9Y530 152 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 SLC22A7Q9Y694 548 aa8.85□□□□□ -0.99
HDAC3-215ENST00000519474 LOC102723996A0A087X1L8 192 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 TRBC2A0A5B9 178 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 NPEPPSL1A6NEC2 478 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 SGK494L7N484 410 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 PHGDHO43175 533 aaKnown RBP8.84□□□□□ -0.99
HDAC3-215ENST00000519474 URI1O94763 535 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-215ENST00000519474 IPO13O94829 963 aaKnown RBP8.84□□□□□ -0.99
HDAC3-215ENST00000519474 B3GALT4O96024 378 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 HPP00738 406 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 HEXBP07686 556 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 CCDC166P0CW27 439 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 C1GALT1C1LP0DN25 315 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 COX6A1P12074 109 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 IL1RNP18510 177 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 GRK3P35626 688 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 GMPRP36959 345 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 SCTRP47872 440 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 HYAL2Q12891 473 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 ILF2Q12905 390 aaKnown RBP8.84□□□□□ -0.99
HDAC3-215ENST00000519474 PWP1Q13610 501 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 UBAP2LQ14157 1087 aaKnown RBP8.84□□□□□ -0.99
HDAC3-215ENST00000519474 USP10Q14694 798 aaKnown RBP8.84□□□□□ -0.99
HDAC3-215ENST00000519474 TGFBIQ15582 683 aa8.84□□□□□ -0.99
HDAC3-215ENST00000519474 KBTBD12Q3ZCT8 623 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms