RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 REG3GQ6UW15 175 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 C16orf54Q6UWD8 224 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 C11orf42Q8N5U0 333 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 RTL3Q8N8U3 475 aaKnown RBP1.94□□□□□ -2.1
PCM1-208ENST00000518877 NEDD4LQ96PU5 975 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 NDNQ99608 321 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 FAM129AQ9BZQ8 928 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 ST6GALNAC4Q9H4F1 302 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 EGLN3Q9H6Z9 239 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.94□□□□□ -2.1
PCM1-208ENST00000518877 LNPEPQ9UIQ6 1025 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 CPSF3Q9UKF6 684 aaKnown RBP1.94□□□□□ -2.1
PCM1-208ENST00000518877 IKZF3Q9UKT9 509 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 CHKBQ9Y259 395 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 FER1L5A0AVI2 2057 aa1.94□□□□□ -2.1
PCM1-208ENST00000518877 A0A1W2PQ72 361 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 TRBC2A0A5B9 178 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 URADA6NGE7 173 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 PRDM1O75626 825 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 LY6G6DO95868 133 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 SERPING1P05155 500 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 MYOGP15173 224 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 ZNF19P17023 458 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 CLNS1AP54105 237 aaKnown RBP1.93□□□□□ -2.1
PCM1-208ENST00000518877 UBXN2AP68543 259 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 MYL7Q01449 175 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 DHODHQ02127 395 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 KLC1Q07866 573 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 SGCGQ13326 291 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 TRIM29Q14134 588 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 ZNF146Q15072 292 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 LACTB2Q53H82 288 aaPredicted RBP1.93□□□□□ -2.1
PCM1-208ENST00000518877 ERMARDQ5T6L9 678 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 RNLSQ5VYX0 342 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 RBPMS2Q6ZRY4 209 aaKnown RBP1.93□□□□□ -2.1
PCM1-208ENST00000518877 C5orf24Q7Z6I8 188 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 OR4N5Q8IXE1 308 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 RASGEF1AQ8N9B8 481 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 AVL9Q8NBF6 648 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 CSNK1G2-AS1Q8NCQ2 148 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 TSPAN14Q8NG11 270 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 OR10G7Q8NGN6 311 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 SSC4DQ8WTU2 575 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 KCNE4Q8WWG9 221 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 NSMAFQ92636 917 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 SPATA33Q96N06 139 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 CCDC28BQ9BUN5 200 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 PRRG4Q9BZD6 226 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 JPT2Q9H910 190 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 RAVER2Q9HCJ3 691 aaKnown RBP1.93□□□□□ -2.1
PCM1-208ENST00000518877 STK26Q9P289 416 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 DDX25Q9UHL0 483 aaKnown RBP1.93□□□□□ -2.1
PCM1-208ENST00000518877 SELENOKQ9Y6D0 94 aa1.93□□□□□ -2.1
PCM1-208ENST00000518877 NEDD4P46934 1319 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 IGHV3-20A0A0C4DH32 117 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 IGHV3-38A0A0C4DH36 116 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 TCRBV21S2A2A0A5A6 115 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 TRAFD1O14545 582 aaPredicted RBP1.92□□□□□ -2.1
PCM1-208ENST00000518877 F3P13726 295 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 IL11P20809 199 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 CPT2P23786 658 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 ELAVL4P26378 380 aaKnown RBP1.92□□□□□ -2.1
PCM1-208ENST00000518877 KHKP50053 298 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 ALDH3A2P51648 485 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 SRSF9Q13242 221 aaKnown RBP eCLIP1.92□□□□□ -2.1
PCM1-208ENST00000518877 PTPRCAPQ14761 206 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 SLC24A5Q71RS6 500 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 ANKRD33Q7Z3H0 272 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 CPEB2Q7Z5Q1 589 aaKnown RBP1.92□□□□□ -2.1
PCM1-208ENST00000518877 IQCHQ86VS3 1027 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 RNF130Q86XS8 419 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 FAM219AQ8IW50 185 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 XXYLT1Q8NBI6 393 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 POGLUT1Q8NBL1 392 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.92□□□□□ -2.1
PCM1-208ENST00000518877 PROX1Q92786 737 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 SPSB1Q96BD6 273 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 PGAP3Q96FM1 320 aaPredicted RBP1.92□□□□□ -2.1
PCM1-208ENST00000518877 SDHCQ99643 169 aaPredicted RBP1.92□□□□□ -2.1
PCM1-208ENST00000518877 UBAC1Q9BSL1 405 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 YTHDF1Q9BYJ9 559 aaKnown RBP1.92□□□□□ -2.1
PCM1-208ENST00000518877 FZD8Q9H461 694 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 RAB9BQ9NP90 201 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 ZNF581Q9P0T4 197 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 C5AR2Q9P296 337 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 ABCD2Q9UBJ2 740 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 BAIAP2L1Q9UHR4 511 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 PLCL2Q9UPR0 1127 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 KAT6BQ8WYB5 2073 aa1.92□□□□□ -2.1
PCM1-208ENST00000518877 C17orf105B2RV13 164 aa1.91□□□□□ -2.1
PCM1-208ENST00000518877 H3BMM5 538 aa1.91□□□□□ -2.1
PCM1-208ENST00000518877 OGTO15294 1046 aa1.91□□□□□ -2.1
PCM1-208ENST00000518877 IPO8O15397 1037 aaKnown RBP1.91□□□□□ -2.1
PCM1-208ENST00000518877 SNX3O60493 162 aa1.91□□□□□ -2.1
PCM1-208ENST00000518877 THY1P04216 161 aa1.91□□□□□ -2.1
PCM1-208ENST00000518877 PCP11498 1178 aaKnown RBP1.91□□□□□ -2.1
PCM1-208ENST00000518877 CD59P13987 128 aa1.91□□□□□ -2.1
PCM1-208ENST00000518877 TCF4P15884 667 aa1.91□□□□□ -2.1
PCM1-208ENST00000518877 ACHEP22303 614 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms