RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 SLC22A17Q8WUG5 538 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 NUS1Q96E22 293 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 IGSF21Q96ID5 467 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 TRMT61BQ9BVS5 477 aaKnown RBP10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 HCN1O60741 890 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 RCVRNP35243 200 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 ADRA1AP35348 466 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 PREPP48147 710 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 VEGFBP49765 207 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 DGKEP52429 567 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 FPGSQ05932 587 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 LARS2Q15031 903 aaKnown RBP10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 RTL4Q6ZR62 310 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 TMEM145Q8NBT3 493 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 SLC38A4Q969I6 547 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 DUS3LQ96G46 650 aaKnown RBP10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 TMEM175Q9BSA9 504 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 CNPPD1Q9BV87 410 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 PCDHGA4Q9Y5G9 962 aa10.51□□□□□ -0.73
PCDHGA1-202ENST00000517417 HAT1O14929 419 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 ITGB1P05556 798 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 PGRP06401 933 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 PRPS1L1P21108 318 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 CRHBPP24387 322 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 IL12RB1P42701 662 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 MAGEA11P43364 429 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 KCNC1P48547 511 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 PLEKHG6Q3KR16 790 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 FAAH2Q6GMR7 532 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 FBXO46Q6PJ61 603 aaPredicted RBP10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 BRAT1Q6PJG6 821 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 SMARCD3Q6STE5 483 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 DCAF4L2Q8NA75 395 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 OR52B6Q8NGF0 335 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 OR8J3Q8NGG0 315 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZFP90Q8TF47 636 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 FRS2Q8WU20 508 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 WDR26Q9H7D7 661 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 ABCD2Q9UBJ2 740 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 IL36AQ9UHA7 158 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 BRWD1Q9NSI6 2320 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 NME6O75414 186 aaPredicted RBP10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 CCNDBP1O95273 360 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZNF865P0CJ78 1059 aaPredicted RBP10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 ADH5P11766 374 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 MXD1Q05195 221 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 IL18R1Q13478 541 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 COL9A2Q14055 689 aaPredicted RBP10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 NDUFAF6Q330K2 333 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 GPRC6AQ5T6X5 926 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 PPP2R2DQ66LE6 453 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 FAM171BQ6P995 826 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 FAM220AQ7Z4H9 259 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZNF514Q96K75 400 aaPredicted RBP10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZNF641Q96N77 438 aaPredicted RBP10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZNF382Q96SR6 550 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 C11orf49Q9H6J7 331 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 C11orf16Q9NQ32 467 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 TRPS1Q9UHF7 1281 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 ENPP5Q9UJA9 477 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 DNAJC25-GNG10A0A024R161 153 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 GADD45GO95257 159 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 SOD2P04179 222 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 KLK1P06870 262 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 TFPIP10646 304 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 CSF2RAP15509 400 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 NCS1P62166 190 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 LRRC32Q14392 662 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 IFI44LQ53G44 452 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 RTP2Q5QGT7 225 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 MARCH8Q5T0T0 291 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 OR2T5Q6IEZ7 315 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 SUSD1Q6UWL2 747 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 ENPP7Q6UWV6 458 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 TMCO2Q7Z6W1 182 aaPredicted RBP10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 TTC9BQ8N6N2 239 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 OR2T29Q8NH02 315 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 NDNFQ8TB73 568 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 PYURFQ96I23 114 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 S100A13Q99584 98 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 GPN2Q9H9Y4 310 aaPredicted RBP10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 OAS3Q9Y6K5 1087 aaKnown RBP10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 PHIPQ8WWQ0 1821 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 FAM86C2PA6NEL3 165 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 DNAJB5O75953 348 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 EPOP01588 193 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 MT-ND2P03891 347 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 ENGP17813 658 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 BDKRB1P46663 353 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 HTR6P50406 440 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 PRR5P85299 388 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZNF155Q12901 538 aaPredicted RBP10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 TIGD6Q17RP2 521 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 PIK3R6Q5UE93 754 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 MZT2AQ6P582 158 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 C22orf39Q6P5X5 142 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 DHRS4L2Q6PKH6 230 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 KRT74Q7RTS7 529 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 LRRTM3Q86VH5 581 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 ATP6V1C2Q8NEY4 427 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms