RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 EXO1Q9UQ84 846 aaKnown RBP5.21□□□□□ -1.58
SCARNA20.4-201ENST00000516969 ERVK-11Q9UQG0 969 aa5.21□□□□□ -1.58
SCARNA20.4-201ENST00000516969 AP3M1Q9Y2T2 418 aa5.21□□□□□ -1.58
SCARNA20.4-201ENST00000516969 PCDHB3Q9Y5E6 796 aa5.21□□□□□ -1.58
SCARNA20.4-201ENST00000516969 PCDHB14Q9Y5E9 798 aa5.21□□□□□ -1.58
SCARNA20.4-201ENST00000516969 COL6A3P12111 3177 aa5.21□□□□□ -1.58
SCARNA20.4-201ENST00000516969 TCRBV5S2A0A599 114 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 TRBC2A0A5B9 178 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 PDZK1P1A8MUH7 402 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 METTL12A8MUP2 240 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 SCAMP1O15126 338 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 SCAMP2O15127 329 aaKnown RBP5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 ARPC2O15144 300 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 NVLO15381 856 aaKnown RBP5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 TNFSF14O43557 240 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 AKAP10O43572 662 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 PEX1O43933 1283 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 PCDH7O60245 1069 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 LCMT2O60294 686 aaKnown RBP5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 KDM1AO60341 852 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 CLEC3AO75596 197 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 LRATO95237 230 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 RASGRP1O95267 797 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 TNFP01375 233 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 LAMP1P11279 417 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 F3P13726 295 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 ATP6V1B2P21281 511 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 HRH2P25021 359 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 BSGP35613 385 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 AHRP35869 848 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 ACTR1BP42025 376 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 KIR3DL1P43629 444 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 SESN3P58005 492 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 OR4D2P58180 307 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 ACTR1AP61163 376 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 PHEXP78562 749 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 ABATP80404 500 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 MLLT1Q03111 559 aaPredicted RBP5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 ZNF763Q0D2J5 394 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 PDE7AQ13946 482 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 FZD2Q14332 565 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 KRT33BQ14525 404 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 UBXN2BQ14CS0 331 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 RBBP5Q15291 538 aaKnown RBP5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 ZIC1Q15915 447 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 DUOXA1Q1HG43 343 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 PGS1Q32NB8 556 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 AASDHQ4L235 1098 aaPredicted RBP5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 SWT1Q5T5J6 900 aaKnown RBP5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 CPTPQ5TA50 214 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 OGFRL1Q5TC84 451 aaPredicted RBP5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 KHDRBS2Q5VWX1 349 aaKnown RBP5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 OR4F3Q6IEY1 312 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 FAM71E1Q6IPT2 247 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 ZNF425Q6IV72 752 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 GPR155Q7Z3F1 870 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 RD3Q7Z3Z2 195 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 UBE3DQ7Z6J8 389 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 GPR180Q86V85 440 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 SPATA24Q86W54 205 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 AMIGO1Q86WK6 493 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 CALHM3Q86XJ0 350 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 PROSER1Q86XN7 944 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 DCP2Q8IU60 420 aaKnown RBP5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 TICAM1Q8IUC6 712 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 SYT12Q8IV01 421 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 KBTBD2Q8IY47 623 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 ADGRF3Q8IZF5 1079 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 LILRA2Q8N149 483 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 PQLC1Q8N2U9 271 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 SPEM1Q8N4L4 309 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 FRMD1Q8N878 549 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 TMEM102Q8N9M5 508 aaPredicted RBP5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 PAPD5Q8NDF8 572 aaKnown RBP5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 CADM4Q8NFZ8 388 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 TTLQ8NG68 377 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 OR2L3Q8NG85 312 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 OR4E2Q8NGC2 313 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 OR52E4Q8NGH9 312 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 GOT1L1Q8NHS2 421 aaPredicted RBP5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 WDR48Q8TAF3 677 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 FLVCR1-AS1Q8TAF5 88 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 C16orf78Q8WTQ4 265 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 CANT1Q8WVQ1 401 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 RLN3Q8WXF3 142 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 GFM2Q969S9 779 aaKnown RBP5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 MIEF2Q96C03 454 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 CCDC115Q96NT0 180 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 SH3GL1Q99961 368 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 KCTD14Q9BQ13 255 aaPredicted RBP5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 CPPED1Q9BRF8 314 aaPredicted RBP5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 TACO1Q9BSH4 297 aaKnown RBP5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 INPP5KQ9BT40 448 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 ACAT2Q9BWD1 397 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 MS4A8Q9BY19 250 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 FOXQ1Q9C009 403 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 REXO4Q9GZR2 422 aaKnown RBP5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 AICDAQ9GZX7 198 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 OR51B5Q9H339 312 aa5.2□□□□□ -1.58
SCARNA20.4-201ENST00000516969 KAT8Q9H7Z6 458 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms