RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 TOMM70O94826 608 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 TRIM16O95361 564 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 NR3C1P04150 777 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 HMOX1P09601 288 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 RAB40ALP0C0E4 278 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 FAM157CP0CG43 387 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 GNB3P16520 340 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 GNAZP19086 355 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 ITGA3P26006 1051 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 TIA1P31483 386 aaKnown RBP eCLIP2.92□□□□□ -1.946e-6■■□□□ 11.4
HERC4-215ENST00000515753 CRKLP46109 303 aaKnown RBP2.92□□□□□ -1.94
HERC4-215ENST00000515753 ASCL1P50553 236 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 THOP1P52888 689 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 CDK3Q00526 305 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 PRKCZQ05513 592 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 PNRC1Q12796 327 aaPredicted RBP2.92□□□□□ -1.94
HERC4-215ENST00000515753 HFEQ30201 348 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 FAM174BQ3ZCQ3 159 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 GCNT6Q5T4J0 391 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 FAM53AQ6NSI3 398 aaPredicted RBP2.92□□□□□ -1.94
HERC4-215ENST00000515753 KLC3Q6P597 504 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 MIER3Q7Z3K6 550 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 NOTCH2NLQ7Z3S9 236 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 PHLDB2Q86SQ0 1253 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 TLK2Q86UE8 772 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 CNNM3Q8NE01 707 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 WDR20Q8TBZ3 569 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.92□□□□□ -1.94
HERC4-215ENST00000515753 SNRNP40Q96DI7 357 aaKnown RBP2.92□□□□□ -1.94
HERC4-215ENST00000515753 ERLEC1Q96DZ1 483 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 PRMT6Q96LA8 375 aaPredicted RBP2.92□□□□□ -1.94
HERC4-215ENST00000515753 SGK494Q96LW2 274 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 PRAM1Q96QH2 718 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 KATNB1Q9BVA0 655 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 KRT23Q9C075 422 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 HSD3B7Q9H2F3 369 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 FN3KQ9H479 309 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 LMAN1LQ9HAT1 526 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 HHATLQ9HCP6 504 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 MIOSQ9NXC5 875 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 DPP3Q9NY33 737 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 TAS2R3Q9NYW6 316 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 HMG20BQ9P0W2 317 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 POLLQ9UGP5 575 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 FBXW2Q9UKT8 454 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 GRIP1Q9Y3R0 1128 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 JRKLQ9Y4A0 524 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 IKBKGQ9Y6K9 419 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 TECPR2O15040 1411 aa2.92□□□□□ -1.94
HERC4-215ENST00000515753 MYOM2P54296 1465 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 PHLPP1O60346 1717 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 TMEM131LA2VDJ0 1609 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 C13orf42A0A1B0GVH6 325 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 MED19A0JLT2 244 aaPredicted RBP2.91□□□□□ -1.94
HERC4-215ENST00000515753 TRIM64CA6NLI5 447 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 VEGFDO43915 354 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 SSX4O60224 188 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 CIDEAO60543 219 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 MED24O75448 989 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 LETM1O95202 739 aaPredicted RBP2.91□□□□□ -1.94
HERC4-215ENST00000515753 PGLSO95336 258 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 NADKO95544 446 aaPredicted RBP2.91□□□□□ -1.94
HERC4-215ENST00000515753 SLC16A8O95907 504 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 CLPTM1O96005 669 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 GH1P01241 217 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 ALPPP05187 535 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 HEXBP07686 556 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 FAM86B2P0C5J1 330 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 PLA2G4BP0C869 781 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 ALPPL2P10696 532 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 ARF4P18085 180 aaPredicted RBP2.91□□□□□ -1.94
HERC4-215ENST00000515753 VCLP18206 1134 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 ACAT1P24752 427 aaKnown RBP2.91□□□□□ -1.94
HERC4-215ENST00000515753 CD27P26842 260 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 NMBRP28336 390 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 CTNNB1P35222 781 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 WNT5AP41221 380 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 TKTL1P51854 596 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 CASP9P55211 416 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 CD81P60033 236 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 POLR2FP61218 127 aaKnown RBP2.91□□□□□ -1.94
HERC4-215ENST00000515753 SNRPEP62304 92 aaKnown RBP2.91□□□□□ -1.94
HERC4-215ENST00000515753 MELKQ14680 651 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 INAQ16352 499 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 KIAA1644Q3SXP7 199 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 AARDQ4LEZ3 155 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 KLHL26Q53HC5 615 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 RNASEH2BQ5TBB1 312 aaKnown RBP2.91□□□□□ -1.94
HERC4-215ENST00000515753 GRTP1Q5TC63 336 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 C12orf60Q5U649 245 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 TXNRD3NBQ6F5E7 133 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 GALNT17Q6IS24 598 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 PRR27Q6MZM9 219 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 CASC4Q6P4E1 433 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 ENPP7Q6UWV6 458 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 NHLRC1Q6VVB1 395 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 DEFB132Q7Z7B7 95 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 CPSF7Q8N684 471 aaKnown RBP2.91□□□□□ -1.94
HERC4-215ENST00000515753 SLC4A11Q8NBS3 891 aa2.91□□□□□ -1.94
HERC4-215ENST00000515753 TBC1D16Q8TBP0 767 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms