RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	RHOT2	Q8IXI1	618 aa		9.83	□□□□□ -0.84
CLDND1-231	ENST00000515620	C16orf52	Q8NHV5	167 aa		9.83	□□□□□ -0.84
CLDND1-231	ENST00000515620	ACTL9	Q8TC94	416 aa		9.83	□□□□□ -0.84
CLDND1-231	ENST00000515620	TSLP	Q969D9	159 aa		9.83	□□□□□ -0.84
CLDND1-231	ENST00000515620	TTYH2	Q9BSA4	534 aa		9.83	□□□□□ -0.84
CLDND1-231	ENST00000515620	ATG10	Q9H0Y0	220 aa		9.83	□□□□□ -0.84
CLDND1-231	ENST00000515620	TRIM45	Q9H8W5	580 aa	Predicted RBP	9.83	□□□□□ -0.84
CLDND1-231	ENST00000515620	NEUROD4	Q9HD90	331 aa		9.83	□□□□□ -0.84
CLDND1-231	ENST00000515620	LMBRD1	Q9NUN5	540 aa		9.83	□□□□□ -0.84
CLDND1-231	ENST00000515620		Q9UFV3	132 aa		9.83	□□□□□ -0.84
CLDND1-231	ENST00000515620	CBLC	Q9ULV8	474 aa		9.83	□□□□□ -0.84
CLDND1-231	ENST00000515620	NBEAL1	Q6ZS30	2694 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	PHF3	Q92576	2039 aa	Known RBP	9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	VPS13C	Q709C8	3753 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	FIGNL2	A6NMB9	653 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	SMTNL1	A8MU46	457 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	SGK494	L7N484	410 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	CDK2AP1	O14519	115 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	RDH16	O75452	317 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	GLI4	P10075	376 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	PSMA3	P25788	255 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	CTNNA2	P26232	953 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	TRHR	P34981	398 aa	Predicted RBP	9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	ADH7	P40394	386 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	OR4D2	P58180	307 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	EIF3E	P60228	445 aa	Known RBP	9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	RHAG	Q02094	409 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	GXYLT1	Q4G148	440 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	ICE2	Q659A1	982 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	KCTD11	Q693B1	232 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	ZNF585A	Q6P3V2	769 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	DARS2	Q6PI48	645 aa	Known RBP	9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	B3GNT6	Q6ZMB0	384 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	LDB1	Q86U70	411 aa	Predicted RBP	9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	KATNAL2	Q8IYT4	538 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	ZFP62	Q8NB50	900 aa	Predicted RBP	9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	OR13J1	Q8NGT2	312 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	MCOLN3	Q8TDD5	553 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	ELP5	Q8TE02	316 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	SMPDL3A	Q92484	453 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	SLCO2A1	Q92959	643 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	FOPNL	Q96NB1	174 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	GOLPH3	Q9H4A6	298 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	LRRC40	Q9H9A6	602 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	ABCF3	Q9NUQ8	709 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	UTP6	Q9NYH9	597 aa	Known RBP	9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	SLC2A6	Q9UGQ3	507 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	FAM215A	Q9Y5M1	114 aa		9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	FBN1	P35555	2871 aa	Known RBP	9.82	□□□□□ -0.84
CLDND1-231	ENST00000515620	FAM166B	A8MTA8	275 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	MAGEB17	A8MXT2	336 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	FCHO1	O14526	889 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	SLC16A5	O15375	505 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	CCNDBP1	O95273	360 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	C8B	P07358	591 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	RBP3	P10745	1247 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	ERG	P11308	486 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	BCL6	P41182	706 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	DCAF7	P61962	342 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	NKX6-1	P78426	367 aa	Predicted RBP	9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	PCBP2	Q15366	365 aa	Known RBP eCLIP	9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	FASTKD1	Q53R41	847 aa	Known RBP	9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	PTRHD1	Q6GMV3	140 aa	Known RBP	9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	PAOX	Q6QHF9	649 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	ZNF534	Q76KX8	674 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	OTOA	Q7RTW8	1153 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	KLHDC8B	Q8IXV7	354 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	RCOR2	Q8IZ40	523 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	CYP4Z2P	Q8N1L4	340 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	OR6P1	Q8NGX9	317 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	ZCCHC10	Q8TBK6	192 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	MAGEC3	Q8TD91	643 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	FAM222B	Q8WU58	562 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	PEX11G	Q96HA9	241 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	COX4I2	Q96KJ9	171 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	SMC6	Q96SB8	1091 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	MACROD1	Q9BQ69	325 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	BPIFA3	Q9BQP9	254 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	LANCL2	Q9NS86	450 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	SPTLC3	Q9NUV7	552 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	DUSP10	Q9Y6W6	482 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	TLN2	Q9Y4G6	2542 aa		9.81	□□□□□ -0.84
CLDND1-231	ENST00000515620	ZNF860	A6NHJ4	632 aa		9.8	□□□□□ -0.84
CLDND1-231	ENST00000515620	INAFM1	C9JVW0	142 aa		9.8	□□□□□ -0.84
CLDND1-231	ENST00000515620		H7C1Q1	480 aa		9.8	□□□□□ -0.84
CLDND1-231	ENST00000515620	PRMT5	O14744	637 aa	Predicted RBP	9.8	□□□□□ -0.84
CLDND1-231	ENST00000515620	AKR1B10	O60218	316 aa		9.8	□□□□□ -0.84
CLDND1-231	ENST00000515620	METTL18	O95568	372 aa		9.8	□□□□□ -0.84
CLDND1-231	ENST00000515620	TACR1	P25103	407 aa		9.8	□□□□□ -0.84
CLDND1-231	ENST00000515620	PPARG	P37231	505 aa	Predicted RBP	9.8	□□□□□ -0.84
CLDND1-231	ENST00000515620	PEX19	P40855	299 aa		9.8	□□□□□ -0.84
CLDND1-231	ENST00000515620	PPIA	P62937	165 aa	Known RBP	9.8	□□□□□ -0.84
CLDND1-231	ENST00000515620	PPP2R2B	Q00005	443 aa		9.8	□□□□□ -0.84
CLDND1-231	ENST00000515620	PLGLB1	Q02325	96 aa		9.8	□□□□□ -0.84
CLDND1-231	ENST00000515620	RELA	Q04206	551 aa		9.8	□□□□□ -0.84
CLDND1-231	ENST00000515620	PRDX1	Q06830	199 aa	Known RBP	9.8	□□□□□ -0.84
CLDND1-231	ENST00000515620	TYSND1	Q2T9J0	566 aa		9.8	□□□□□ -0.84
CLDND1-231	ENST00000515620	ASTE1	Q2TB18	679 aa	Predicted RBP	9.8	□□□□□ -0.84

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