RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 UTRNP46939 3433 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 PTGESO14684 152 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 CELF2O95319 508 aaKnown RBP3.16□□□□□ -1.9
LINC01088-211ENST00000515597 IGHV3-13P01766 116 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 IGHEP01854 428 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 MYL6BP14649 208 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 ERCC2P18074 760 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 TSFMP43897 325 aaKnown RBP3.16□□□□□ -1.9
LINC01088-211ENST00000515597 LIMK1P53667 647 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 RBPJQ06330 500 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 MTF1Q14872 753 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 KYNUQ16719 465 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 RBPMS2Q6ZRY4 209 aaKnown RBP3.16□□□□□ -1.9
LINC01088-211ENST00000515597 C11orf53Q8IXP5 236 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 TDRD5Q8NAT2 981 aaKnown RBP3.16□□□□□ -1.9
LINC01088-211ENST00000515597 NOA1Q8NC60 698 aaKnown RBP3.16□□□□□ -1.9
LINC01088-211ENST00000515597 MIPOL1Q8TD10 442 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 LRRC15Q8TF66 581 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 PIGBQ92521 554 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 CNDP2Q96KP4 475 aaKnown RBP3.16□□□□□ -1.9
LINC01088-211ENST00000515597 C4orf45Q96LM5 186 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 AGAP4Q96P64 663 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 LRRC3BQ96PB8 259 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 FEVQ99581 238 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 CPNE1Q99829 537 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 TLE6Q9H808 572 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 TERF2IPQ9NYB0 399 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 TBC1D7Q9P0N9 293 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 RNF150Q9ULK6 438 aa3.16□□□□□ -1.9
LINC01088-211ENST00000515597 PNPLA6Q8IY17 1366 aa3.15□□□□□ -1.9
LINC01088-211ENST00000515597 KDM5DQ9BY66 1539 aa3.15□□□□□ -1.9
LINC01088-211ENST00000515597 TET3O43151 1660 aa3.15□□□□□ -1.9
LINC01088-211ENST00000515597 LOC105371242A0A075B767 164 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 TEX28O15482 410 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 PLOD3O60568 738 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 DNTTP04053 509 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 CD22P20273 847 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 ACHEP22303 614 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 KCTD2Q14681 263 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 NPTX1Q15818 432 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 EXT1Q16394 746 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 NOTUMQ6P988 496 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 Q6ZR54 194 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 CHST3Q7LGC8 479 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 OR8H2Q8N162 312 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 PI4KAP1Q8N8J0 262 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 AQP11Q8NBQ7 271 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 OR6J1Q8NGC5 347 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 SNRNP27Q8WVK2 155 aaKnown RBP3.15□□□□□ -1.91
LINC01088-211ENST00000515597 RMDN1Q96DB5 314 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 OTUB1Q96FW1 271 aaPredicted RBP3.15□□□□□ -1.91
LINC01088-211ENST00000515597 FAM71F1Q96KD3 344 aaPredicted RBP3.15□□□□□ -1.91
LINC01088-211ENST00000515597 LINC00615Q96LM1 132 aaPredicted RBP3.15□□□□□ -1.91
LINC01088-211ENST00000515597 MUS81Q96NY9 551 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 SPAG5Q96R06 1193 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 LPAR4Q99677 370 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 TXNDC16Q9P2K2 825 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 WDR35Q9P2L0 1181 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 CHKBQ9Y259 395 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 WDR83OSQ9Y284 106 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 WIPI2Q9Y4P8 454 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 PLXNC1O60486 1568 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 GLI3P10071 1580 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 UGGT1Q9NYU2 1555 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 CDC42BPBQ9Y5S2 1711 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 HCFC1P51610 2035 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 ARHGAP23Q9P227 1491 aa3.15□□□□□ -1.91
LINC01088-211ENST00000515597 PRDM15P57071 1507 aaPredicted RBP3.14□□□□□ -1.91
LINC01088-211ENST00000515597 ATP7AQ04656 1500 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 SHANK3Q9BYB0 1731 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 SETD5Q9C0A6 1442 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 A0A087WUV0 522 aaPredicted RBP3.14□□□□□ -1.91
LINC01088-211ENST00000515597 PI4K2BG5E9Z4 385 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 UBE2CO00762 179 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 SPRY1O43609 319 aaPredicted RBP3.14□□□□□ -1.91
LINC01088-211ENST00000515597 RPS6KA5O75582 802 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 CEACAM4O75871 244 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 ACSL3O95573 720 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 CCDC175P0C221 793 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 OR52Z1P0C646 297 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 PRKAR1AP10644 381 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 PRG2P13727 222 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 EPCAMP16422 314 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 VAMP7P51809 220 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 XGP55808 180 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 POLR2LP62875 67 aaKnown RBP3.14□□□□□ -1.91
LINC01088-211ENST00000515597 ACSM1Q08AH1 577 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 OR4A47Q6IF82 309 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
LINC01088-211ENST00000515597 TLK2Q86UE8 772 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 POM121L12Q8N7R1 296 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 RASGEF1AQ8N9B8 481 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 CCDC191Q8NCU4 936 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 C11orf45Q8TAV5 145 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 KCNE4Q8WWG9 221 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 PROX1Q92786 737 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 SPSB1Q96BD6 273 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 SLC45A3Q96JT2 553 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 ZNF558Q96NG5 402 aa3.14□□□□□ -1.91
LINC01088-211ENST00000515597 OVOL2Q9BRP0 275 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms