RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, human

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-222	ENST00000515494	CLIP4	Q8N3C7	705 aa		10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	EFHD2	Q96C19	240 aa	Predicted RBP	10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	THUMPD3	Q9BV44	507 aa	Known RBP	10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	RPF2	Q9H7B2	306 aa	Known RBP	10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	COQ10B	Q9H8M1	238 aa		10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	SAC3D1	A6NKF1	404 aa		10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	QSOX1	O00391	747 aa		10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	MBTPS2	O43462	519 aa		10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	TSPAN9	O75954	239 aa		10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	UBL4A	P11441	157 aa		10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	PCNA	P12004	261 aa		10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	BMX	P51813	675 aa		10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	APOF	Q13790	326 aa		10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	WSCD2	Q2TBF2	565 aa		10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	GPR107	Q5VW38	600 aa		10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	ANKRD26P1	Q6NSI1	321 aa		10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	METTL2B	Q6P1Q9	378 aa	Known RBP	10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	GPR156	Q8NFN8	814 aa		10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	LILRB4	Q8NHJ6	448 aa		10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	PRDM6	Q9NQX0	595 aa		10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	SLC25A37	Q9NYZ2	338 aa		10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	ACTR3B	Q9P1U1	418 aa		10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	PPT2	Q9UMR5	302 aa		10.15	□□□□□ -0.78
CDK18-222	ENST00000515494	WDR87	Q6ZQQ6	2873 aa		10.15	□□□□□ -0.79
CDK18-222	ENST00000515494	MAGEB17	A8MXT2	336 aa		10.15	□□□□□ -0.79
CDK18-222	ENST00000515494	EIF2S1	P05198	315 aa	Known RBP	10.15	□□□□□ -0.79
CDK18-222	ENST00000515494	JUP	P14923	745 aa		10.15	□□□□□ -0.79
CDK18-222	ENST00000515494	TBPL1	P62380	186 aa		10.15	□□□□□ -0.79
CDK18-222	ENST00000515494	INPP5A	Q14642	412 aa		10.15	□□□□□ -0.79
CDK18-222	ENST00000515494	ZNF658B	Q4V348	819 aa	Predicted RBP	10.15	□□□□□ -0.79
CDK18-222	ENST00000515494	SIGIRR	Q6IA17	410 aa		10.15	□□□□□ -0.79
CDK18-222	ENST00000515494	C10orf111	Q8N326	155 aa		10.15	□□□□□ -0.79
CDK18-222	ENST00000515494	OR10A6	Q8NH74	314 aa		10.15	□□□□□ -0.79
CDK18-222	ENST00000515494	INPP5K	Q9BT40	448 aa		10.15	□□□□□ -0.79
CDK18-222	ENST00000515494	RSPH9	Q9H1X1	276 aa	Predicted RBP	10.15	□□□□□ -0.79
CDK18-222	ENST00000515494	CA14	Q9ULX7	337 aa		10.15	□□□□□ -0.79
CDK18-222	ENST00000515494	PCDHGA8	Q9Y5G5	932 aa		10.15	□□□□□ -0.79
CDK18-222	ENST00000515494	CRYZL1	O95825	349 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	DNTT	P04053	509 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	GBA	P04062	536 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	HRH2	P25021	359 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	EIF2D	P41214	584 aa	Known RBP	10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	GRSF1	Q12849	480 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	MAD2L1	Q13257	205 aa	Predicted RBP	10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	CAMK2G	Q13555	558 aa	Predicted RBP	10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	GTF2H3	Q13889	308 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	FGL2	Q14314	439 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	DHRS4L2	Q6PKH6	230 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	TMEM92	Q6UXU6	159 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	C11orf96	Q7Z7L8	435 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	TICAM1	Q8IUC6	712 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	MSRB3	Q8IXL7	192 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	DPP10	Q8N608	796 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	FRMD1	Q8N878	549 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	OR5AR1	Q8NGP9	310 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	HMGB4	Q8WW32	186 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	CLMP	Q9H6B4	373 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	SGK2	Q9HBY8	427 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	ASF1A	Q9Y294	204 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	MUC22	E2RYF6	1773 aa	Predicted RBP	10.14	□□□□□ -0.79
CDK18-222	ENST00000515494		A0A1W2PQF6	199 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	CCRL2	O00421	344 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	SAP18	O00422	153 aa	Known RBP	10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	SEC24D	O94855	1032 aa	Predicted RBP	10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	KCNH1	O95259	989 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	FOXM1	Q08050	763 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	PWP1	Q13610	501 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	LRIT3	Q3SXY7	679 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	TMEM52B	Q4KMG9	183 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	ZNF776	Q68DI1	518 aa	Predicted RBP	10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	NOXRED1	Q6NXP6	359 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	GALNT18	Q6P9A2	607 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	SLC38A6	Q8IZM9	456 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	DTWD1	Q8N5C7	304 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	SLC15A4	Q8N697	577 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	KIAA1958	Q8N8K9	716 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	OR7A2P	Q8NGA2	310 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	ZCCHC2	Q9C0B9	1178 aa	Known RBP	10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	C2orf42	Q9NWW7	574 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	GPRC5B	Q9NZH0	403 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	ZFR2	Q9UPR6	939 aa	Known RBP	10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	MYRF	Q9Y2G1	1151 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494		A0A1W2PQU0	124 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	C7orf72	A4D263	438 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	ICMT	O60725	284 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	AMD1	P17707	334 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	CDKN2C	P42773	168 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	NR4A2	P43354	598 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	RPS3A	P61247	264 aa	Known RBP	10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	GGTA1P	Q4G0N0	100 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	OR4F3	Q6IEY1	312 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	ADGRG5	Q8IZF4	528 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	CADM3	Q8N126	398 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	ZNF740	Q8NDX6	193 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	SIPA1	Q96FS4	1042 aa		10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	RMND5B	Q96G75	393 aa	Predicted RBP	10.14	□□□□□ -0.79
CDK18-222	ENST00000515494	SPEG	Q15772	3267 aa		10.13	□□□□□ -0.79
CDK18-222	ENST00000515494	ATE1	O95260	518 aa		10.13	□□□□□ -0.79

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