RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 ZNF160Q9HCG1 818 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 ATP13A2Q9NQ11 1180 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 NINJ2Q9NZG7 142 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 ANAPC2Q9UJX6 822 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 MKL2Q9ULH7 1088 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 CDC14AQ9UNH5 594 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 NOVA2Q9UNW9 492 aaKnown RBP10.9□□□□□ -0.66
VCAN-212ENST00000515397 DYRK1BQ9Y463 629 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 PCDHGA9Q9Y5G4 932 aaKnown RBP10.9□□□□□ -0.66
VCAN-212ENST00000515397 FLNCQ14315 2725 aa10.9□□□□□ -0.66
VCAN-212ENST00000515397 IGHV3-20A0A0C4DH32 117 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 HMX2A2RU54 273 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 TTLL8A6PVC2 850 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 TXNDC9O14530 226 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 NDUFS4O43181 175 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 CDC123O75794 336 aaPredicted RBP10.89□□□□□ -0.67
VCAN-212ENST00000515397 ACSL3O95573 720 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 CELA2AP08217 269 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 GSTA2P09210 222 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 CTAGE8P0CG41 777 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 GRK3P35626 688 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 AVPR1BP47901 424 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 HSPA7P48741 367 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 ST13P50502 369 aaKnown RBP10.89□□□□□ -0.67
VCAN-212ENST00000515397 EMP3P54852 163 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 RAB8AP61006 207 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 RAB10P61026 200 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 OLR1P78380 273 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 IRF9Q00978 393 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 KCNC4Q03721 635 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 TGFBIQ15582 683 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 NDUFA9Q16795 377 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 TMEM214Q6NUQ4 689 aaKnown RBP10.89□□□□□ -0.67
VCAN-212ENST00000515397 NXPE4Q6UWF7 544 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 CTAGE4Q8IX94 777 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 ANKRD53Q8N9V6 530 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 CAMKVQ8NCB2 501 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 OR4K1Q8NGD4 311 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 OR51Q1Q8NH59 317 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 NXNL1Q96CM4 212 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 TSPAN17Q96FV3 270 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 IP6K3Q96PC2 410 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 TMEM79Q9BSE2 394 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 SEMA3GQ9NS98 782 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 CD274Q9NZQ7 290 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 NXT1Q9UKK6 140 aaKnown RBP10.89□□□□□ -0.67
VCAN-212ENST00000515397 NAALAD2Q9Y3Q0 740 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 ZNF451Q9Y4E5 1061 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 MAP4K5Q9Y4K4 846 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 ASB1Q9Y576 335 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 CSAG2Q9Y5P2 127 aa10.89□□□□□ -0.67
VCAN-212ENST00000515397 IGLV3-12A0A075B6K2 115 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 A0A0G2JN53 185 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 PRAMEF4O60810 478 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 KLHL18O94889 574 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 BMP10O95393 424 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 ZNF888P0CJ79 500 aaPredicted RBP10.88□□□□□ -0.67
VCAN-212ENST00000515397 SLC35E2BP0CK96 405 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 TFEBP19484 476 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 STX2P32856 288 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 XCR1P46094 333 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 AGTR2P50052 363 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 FAM53BQ14153 422 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 MYBPC3Q14896 1274 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 ZKSCAN8Q15776 578 aaPredicted RBP10.88□□□□□ -0.67
VCAN-212ENST00000515397 TUBB8Q3ZCM7 444 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 PLEKHN1Q494U1 663 aaPredicted RBP10.88□□□□□ -0.67
VCAN-212ENST00000515397 MINDY4Q4G0A6 757 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 DEFB134Q4QY38 66 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 PRAMEF9Q5VWM5 478 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 ATG9BQ674R7 924 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 ADNP2Q6IQ32 1131 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 JMJD6Q6NYC1 403 aaPredicted RBP10.88□□□□□ -0.67
VCAN-212ENST00000515397 LINC00696Q6ZRV3 163 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 LANCL3Q6ZV70 420 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 ADAMTSL2Q86TH1 951 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 SNX31Q8N9S9 440 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 LRRN4CLQ8ND94 238 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 KIF18AQ8NI77 898 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 KCTD4Q8WVF5 259 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 ANKRD7Q92527 254 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 THAP11Q96EK4 314 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 C19orf60Q96EN9 201 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 MVB12AQ96EY5 273 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 PEX11GQ96HA9 241 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 THOC3Q96J01 351 aaKnown RBP10.88□□□□□ -0.67
VCAN-212ENST00000515397 UBXN10Q96LJ8 280 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 SMAD5Q99717 465 aaKnown RBP10.88□□□□□ -0.67
VCAN-212ENST00000515397 AICDAQ9GZX7 198 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 RHBGQ9H310 441 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 POPDC3Q9HBV1 291 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 ANKHQ9HCJ1 492 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 IGSF5Q9NSI5 407 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 WWOXQ9NZC7 414 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 MAP10Q9P2G4 905 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 RNF112Q9ULX5 631 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 KCNE2Q9Y6J6 123 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 RELNP78509 3460 aa10.88□□□□□ -0.67
VCAN-212ENST00000515397 DOCK10Q96BY6 2186 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 SCN2AQ99250 2005 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms