RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 FOXL2P58012 376 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 IRF8Q02556 426 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 IFFO1Q0D2I5 559 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 DOC2AQ14183 400 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 SLBPQ14493 270 aaKnown RBP eCLIP13.28□□□□□ -0.28
USP46-209ENST00000514536 RASA2Q15283 850 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 XKR6Q5GH73 641 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 PRMT9Q6P2P2 845 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 OVCH1Q7RTY7 1134 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 SYVN1Q86TM6 617 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 TMEM151AQ8N4L1 468 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 PTGR2Q8N8N7 351 aaPredicted RBP13.28□□□□□ -0.28
USP46-209ENST00000514536 ANKRD53Q8N9V6 530 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 ZFP69BQ9UJL9 534 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 TCFL5Q9UL49 500 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 ANGPTL3Q9Y5C1 460 aa13.28□□□□□ -0.28
USP46-209ENST00000514536 BAHCC1Q9P281 2608 aa13.27□□□□□ -0.29
USP46-209ENST00000514536 CDC14CA4D256 554 aa13.27□□□□□ -0.29
USP46-209ENST00000514536 FOXS1O43638 330 aa13.27□□□□□ -0.29
USP46-209ENST00000514536 CNOT3O75175 753 aaKnown RBP13.27□□□□□ -0.29
USP46-209ENST00000514536 SMIM24O75264 130 aa13.27□□□□□ -0.29
USP46-209ENST00000514536 SIX3O95343 332 aaPredicted RBP13.27□□□□□ -0.29
USP46-209ENST00000514536 FURINP09958 794 aa13.27□□□□□ -0.29
USP46-209ENST00000514536 SBK3P0C264 359 aa13.27□□□□□ -0.29
USP46-209ENST00000514536 EPB42P16452 691 aa13.27□□□□□ -0.29
USP46-209ENST00000514536 AHRP35869 848 aa13.27□□□□□ -0.29
USP46-209ENST00000514536 CDC20Q12834 499 aa13.27□□□□□ -0.29
USP46-209ENST00000514536 CHIT1Q13231 466 aa13.27□□□□□ -0.29
USP46-209ENST00000514536 FAM53BQ14153 422 aa13.27□□□□□ -0.29
USP46-209ENST00000514536 PCBP2Q15366 365 aaKnown RBP eCLIP13.27□□□□□ -0.292e-6■■■■■ 40.3
USP46-209ENST00000514536 TMEM214Q6NUQ4 689 aaKnown RBP13.27□□□□□ -0.29
USP46-209ENST00000514536 MRPL14Q6P1L8 145 aaKnown RBP13.27□□□□□ -0.29
USP46-209ENST00000514536 COX15Q7KZN9 410 aa13.27□□□□□ -0.29
USP46-209ENST00000514536 KRT78Q8N1N4 520 aa13.27□□□□□ -0.29
USP46-209ENST00000514536 MREGQ8N565 214 aa13.27□□□□□ -0.29
USP46-209ENST00000514536 ZCCHC10Q8TBK6 192 aa13.27□□□□□ -0.29
USP46-209ENST00000514536 PTCD3Q96EY7 689 aaKnown RBP13.27□□□□□ -0.29
USP46-209ENST00000514536 MMABQ96EY8 250 aaPredicted RBP13.27□□□□□ -0.29
USP46-209ENST00000514536 BBC3Q96PG8 261 aaPredicted RBP13.27□□□□□ -0.29
USP46-209ENST00000514536 YIPF2Q9BWQ6 316 aa13.27□□□□□ -0.29
USP46-209ENST00000514536 FAM117AQ9C073 453 aa13.27□□□□□ -0.29
USP46-209ENST00000514536 DRC3Q9H069 523 aa13.27□□□□□ -0.29
USP46-209ENST00000514536 EHD1Q9H4M9 534 aa13.27□□□□□ -0.29
USP46-209ENST00000514536 DCDC2Q9UHG0 476 aa13.27□□□□□ -0.29
USP46-209ENST00000514536 TMCO1Q9UM00 188 aa13.27□□□□□ -0.29
USP46-209ENST00000514536 CDC14AQ9UNH5 594 aa13.27□□□□□ -0.29
USP46-209ENST00000514536 TNPO3Q9Y5L0 923 aaKnown RBP13.27□□□□□ -0.29
USP46-209ENST00000514536 IGSF10Q6WRI0 2623 aa13.26□□□□□ -0.29
USP46-209ENST00000514536 NDUFS4O43181 175 aa13.26□□□□□ -0.29
USP46-209ENST00000514536 KLF7O75840 302 aaPredicted RBP13.26□□□□□ -0.29
USP46-209ENST00000514536 RECKO95980 971 aa13.26□□□□□ -0.29
USP46-209ENST00000514536 CD63P08962 238 aa13.26□□□□□ -0.29
USP46-209ENST00000514536 SLC35G6P0C7Q6 338 aa13.26□□□□□ -0.29
USP46-209ENST00000514536 EEF1DP29692 281 aaKnown RBP13.26□□□□□ -0.29
USP46-209ENST00000514536 PWP1Q13610 501 aa13.26□□□□□ -0.29
USP46-209ENST00000514536 IL10RAQ13651 578 aa13.26□□□□□ -0.29
USP46-209ENST00000514536 DEFB109BQ30KR1 87 aa13.26□□□□□ -0.29
USP46-209ENST00000514536 CRTC2Q53ET0 693 aaPredicted RBP13.26□□□□□ -0.29
USP46-209ENST00000514536 TMIGD1Q6UXZ0 262 aa13.26□□□□□ -0.29
USP46-209ENST00000514536 SH2D5Q6ZV89 423 aa13.26□□□□□ -0.29
USP46-209ENST00000514536 LCA5Q86VQ0 697 aa13.26□□□□□ -0.29
USP46-209ENST00000514536 TMEM151BQ8IW70 566 aa13.26□□□□□ -0.29
USP46-209ENST00000514536 TRPV3Q8NET8 790 aa13.26□□□□□ -0.29
USP46-209ENST00000514536 NT5CQ8TCD5 201 aa13.26□□□□□ -0.29
USP46-209ENST00000514536 WDR34Q96EX3 536 aa13.26□□□□□ -0.29
USP46-209ENST00000514536 MVB12AQ96EY5 273 aa13.26□□□□□ -0.29
USP46-209ENST00000514536 ROPN1BQ9BZX4 212 aaPredicted RBP13.26□□□□□ -0.29
USP46-209ENST00000514536 NT5DC2Q9H857 520 aa13.26□□□□□ -0.29
USP46-209ENST00000514536 ROPN1Q9HAT0 212 aaPredicted RBP13.26□□□□□ -0.29
USP46-209ENST00000514536 ZNF490Q9ULM2 529 aaPredicted RBP13.26□□□□□ -0.29
USP46-209ENST00000514536 PLAAQ9Y263 795 aa13.26□□□□□ -0.29
USP46-209ENST00000514536 PADI2Q9Y2J8 665 aa13.26□□□□□ -0.29
USP46-209ENST00000514536 PTRH2Q9Y3E5 179 aaKnown RBP13.26□□□□□ -0.29
USP46-209ENST00000514536 FASNP49327 2511 aaKnown RBP13.25□□□□□ -0.29
USP46-209ENST00000514536 FFAR3O14843 346 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 GPR42O15529 346 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 WFS1O76024 890 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 ALBP02768 609 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 GSTA1P08263 222 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 IL1RNP18510 177 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 CD22P20273 847 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 FBLP22087 321 aaKnown RBP13.25□□□□□ -0.29
USP46-209ENST00000514536 HNF4AP41235 474 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 CASP2P42575 452 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 AVPR1BP47901 424 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 RHDQ02161 417 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 RGS1Q08116 209 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 GTF2H2Q13888 395 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 TBCCQ15814 346 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 NKG7Q16617 165 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 TBR1Q16650 682 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 HIST2H2ACQ16777 129 aaPredicted RBP13.25□□□□□ -0.29
USP46-209ENST00000514536 UGT8Q16880 541 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 HIST2H2AA3Q6FI13 130 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 GTF2H2CQ6P1K8 395 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 PRSS41Q7RTY9 318 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 GOLGA7Q7Z5G4 137 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.25□□□□□ -0.29
USP46-209ENST00000514536 OR9A4Q8NGU2 314 aa13.25□□□□□ -0.29
USP46-209ENST00000514536 CREB3L4Q8TEY5 395 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms