RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 NBASA2RRP1 2371 aa15.31■□□□□ 0.04
PDLIM5-212ENST00000509333 NCF1BA6NI72 391 aaPredicted RBP15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 NCF1CA8MVU1 366 aaPredicted RBP15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 H0YIG0 161 aa15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 PRPF4O43172 522 aaKnown RBP eCLIP15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 SLC28A2O43868 658 aa15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 PRAMEF4O60810 478 aa15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 H2AFYO75367 372 aaKnown RBP15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 NSA2O95478 260 aaKnown RBP15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 C1GALT1C1LP0DN25 315 aa15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 NCF1P14598 390 aaPredicted RBP15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 VARSP26640 1264 aaKnown RBP15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 AHRP35869 848 aa15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 AVPR1BP47901 424 aa15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 EMP2P54851 167 aa15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 MAT1AQ00266 395 aaKnown RBP15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 KLRB1Q12918 225 aa15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 PRAMEF9Q5VWM5 478 aa15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 ATG14Q6ZNE5 492 aa15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 RAPH1Q70E73 1250 aa15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 FRA10AC1Q70Z53 315 aa15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 PRSS41Q7RTY9 318 aa15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 PRSS58Q8IYP2 241 aa15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 TCAIMQ8N3R3 496 aa15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 AFAP1L2Q8N4X5 818 aa15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 OR11G2Q8NGC1 345 aa15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 SMAD5Q99717 465 aaKnown RBP15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 MESP1Q9BRJ9 268 aa15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 CRB3Q9BUF7 120 aa15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 NUDT9Q9BW91 350 aa15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 ZFP69BQ9UJL9 534 aa15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 C3orf18Q9UK00 162 aa15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 NFU1Q9UMS0 254 aa15.3■□□□□ 0.04
PDLIM5-212ENST00000509333 J3QKU1 62 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 MAP2K7O14733 419 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 DNAJB6O75190 326 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 WDR47O94967 919 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 BMP10O95393 424 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 ACSL3O95573 720 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 LTA4HP09960 611 aaKnown RBP15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 SMIM10L1P0DMW3 83 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 GNAZP19086 355 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 PGDP52209 483 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 CCDC91Q7Z6B0 441 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 PDSS2Q86YH6 399 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 IFT20Q8IY31 132 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 GALNT16Q8N428 558 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 ANKRD53Q8N9V6 530 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 TEX19Q8NA77 164 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 OR51Q1Q8NH59 317 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 CREB3L4Q8TEY5 395 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 SLC44A1Q8WWI5 657 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 SMIM10Q96HG1 83 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 GPR78Q96P69 363 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 ATOH8Q96SQ7 321 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 AIF1LQ9BQI0 150 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 TMEM79Q9BSE2 394 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 CAPS2Q9BXY5 557 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 ALG9Q9H6U8 611 aa15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 ZNF552Q9H707 407 aaPredicted RBP15.29■□□□□ 0.04
PDLIM5-212ENST00000509333 DOCK10Q96BY6 2186 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 TNRC6AQ8NDV7 1962 aaKnown RBP15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 IDSB3KWA1 339 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 SGK494L7N484 410 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 STK16O75716 305 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 MTHFD2P13995 350 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 TFEBP19484 476 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 CASRP41180 1078 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 EFNA3P52797 238 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 REEP5Q00765 189 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 HYAL2Q12891 473 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 BMPR2Q13873 1038 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 MYBPC3Q14896 1274 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 SLMAPQ14BN4 828 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 RBBP5Q15291 538 aaKnown RBP15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 RBBP7Q16576 425 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 FBXO48Q5FWF7 155 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 PRICKLE2Q7Z3G6 844 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 TBC1D1Q86TI0 1168 aaPredicted RBP15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 ZC3H7AQ8IWR0 971 aaKnown RBP15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 CENPLQ8N0S6 344 aaPredicted RBP15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 TBC1D19Q8N5T2 526 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 PDPRQ8NCN5 879 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 NT5CQ8TCD5 201 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 NT5DC2Q9H857 520 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 CNOT10Q9H9A5 744 aaKnown RBP15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 ANKHQ9HCJ1 492 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 SNX15Q9NRS6 342 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 GPR83Q9NYM4 423 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 GPRC5BQ9NZH0 403 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 CD274Q9NZQ7 290 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 C5AR2Q9P296 337 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 COPG2Q9UBF2 871 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 FBXL4Q9UKA2 621 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 ZNF490Q9ULM2 529 aaPredicted RBP15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 RNF112Q9ULX5 631 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 ZNF451Q9Y4E5 1061 aa15.28■□□□□ 0.04
PDLIM5-212ENST00000509333 A0A087X1B8 175 aa15.27■□□□□ 0.04
PDLIM5-212ENST00000509333 A0A096LPK6 155 aa15.27■□□□□ 0.04
PDLIM5-212ENST00000509333 GALR3O60755 368 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms