RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 NPEPPSL1A6NEC2 478 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 H0YIG0 161 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 CDC7O00311 574 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 VARSP26640 1264 aaKnown RBP13.51□□□□□ -0.25
RAB28-205ENST00000508274 AP1S2P56377 157 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 TAS2R39P59534 338 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 PCOLCEQ15113 449 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 PPP1R3AQ16821 1122 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 CATSPEREQ5SY80 951 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 DUPD1Q68J44 220 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 TMEM205Q6UW68 189 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 LANCL3Q6ZV70 420 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 STRA8Q7Z7C7 330 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 ASPGQ86U10 573 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 KBTBD2Q8IY47 623 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 C17orf53Q8N3J3 647 aaPredicted RBP13.51□□□□□ -0.25
RAB28-205ENST00000508274 CAMKVQ8NCB2 501 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 ZNF740Q8NDX6 193 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 CATSPER1Q8NEC5 780 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 SLC13A3Q8WWT9 602 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 NEIL2Q969S2 332 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 FBXL8Q96CD0 374 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 THAP11Q96EK4 314 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 MOCOSQ96EN8 888 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 TSNARE1Q96NA8 513 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 HAUS8Q9BT25 410 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 DPH5Q9H2P9 285 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 SMYD2Q9NRG4 433 aa13.51□□□□□ -0.25
RAB28-205ENST00000508274 COPG1Q9Y678 874 aaKnown RBP13.51□□□□□ -0.25
RAB28-205ENST00000508274 IGHV3-20A0A0C4DH32 117 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 CTAGE15A4D2H0 777 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 PABPN1LA6NDY0 278 aaKnown RBP13.5□□□□□ -0.25
RAB28-205ENST00000508274 ZNF860A6NHJ4 632 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 RDH16O75452 317 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 CBX6O95503 412 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 GRK3P35626 688 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 XCR1P46094 333 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 C2orf54Q08AI8 447 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 MFAP5Q13361 173 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 ZNF169Q14929 603 aaPredicted RBP13.5□□□□□ -0.25
RAB28-205ENST00000508274 MINDY4Q4G0A6 757 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 MFSD4BQ5TF39 518 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 B3GNTL1Q67FW5 361 aaPredicted RBP13.5□□□□□ -0.25
RAB28-205ENST00000508274 HIST2H2BCQ6DN03 193 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 CTAGE6Q86UF2 777 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 ZGRF1Q86YA3 2104 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 CEP97Q8IW35 865 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 MFSD9Q8NBP5 474 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 ABHD11Q8NFV4 315 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 OR51Q1Q8NH59 317 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 ANKRD49Q8WVL7 239 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 PDLIM5Q96HC4 596 aaKnown RBP13.5□□□□□ -0.25
RAB28-205ENST00000508274 BARD1Q99728 777 aaKnown RBP13.5□□□□□ -0.25
RAB28-205ENST00000508274 RBCK1Q9BYM8 510 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 TRIM54Q9BYV2 358 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 ZNF700Q9H0M5 742 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 LRRC4CQ9HCJ2 640 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 RIC8BQ9NVN3 520 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 PLA2G3Q9NZ20 509 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 RNF14Q9UBS8 474 aa13.5□□□□□ -0.25
RAB28-205ENST00000508274 RAD51CO43502 376 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 OR1F1O43749 312 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 SEC24DO94855 1032 aaPredicted RBP13.49□□□□□ -0.25
RAB28-205ENST00000508274 B3GALT4O96024 378 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 F10P00742 488 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 SERPINA7P05543 415 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 ENO2P09104 434 aaPredicted RBP13.49□□□□□ -0.25
RAB28-205ENST00000508274 SLC35G6P0C7Q6 338 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 C8orf89P0DMQ9 161 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 ITGAMP11215 1152 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 GP1BBP13224 206 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 SOX11P35716 441 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 CCR8P51685 355 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 CDC16Q13042 620 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 OR4K1Q8NGD4 311 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 OR5T3Q8NGG3 340 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 SSC4DQ8WTU2 575 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 MCMBPQ9BTE3 642 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 UNKQ9C0B0 810 aaKnown RBP13.49□□□□□ -0.25
RAB28-205ENST00000508274 ANKHQ9HCJ1 492 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 NAALAD2Q9Y3Q0 740 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 CXorf49A8MYA2 514 aaPredicted RBP13.49□□□□□ -0.25
RAB28-205ENST00000508274 NDUFS4O43181 175 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 DNAJB6O75190 326 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 CDC123O75794 336 aaPredicted RBP13.49□□□□□ -0.25
RAB28-205ENST00000508274 SSTR1P30872 391 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 TSFMP43897 325 aaKnown RBP13.49□□□□□ -0.25
RAB28-205ENST00000508274 ARG2P78540 354 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 TLR1Q15399 786 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 C18orf21Q32NC0 220 aaPredicted RBP13.49□□□□□ -0.25
RAB28-205ENST00000508274 GRHL3Q8TE85 626 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 SLC5A11Q8WWX8 675 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 ATL1Q8WXF7 558 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 VPS39Q96JC1 886 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 IMMP1LQ96LU5 166 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 LMF1Q96S06 567 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 CYTH2Q99418 400 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 SARGQ9BW04 601 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 SAYSD1Q9NPB0 183 aa13.49□□□□□ -0.25
RAB28-205ENST00000508274 TRBC2A0A5B9 178 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms