RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 THAP5Q7Z6K1 395 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 NPAS3Q8IXF0 933 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 ZZZ3Q8IYH5 903 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 C7orf61Q8IZ16 206 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 SLC15A4Q8N697 577 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 CHDHQ8NE62 594 aaPredicted RBP13.96□□□□□ -0.17
DDX41-208ENST00000507955 FGF13Q92913 245 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 BORCS5Q969J3 196 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 CIDECQ96AQ7 238 aaPredicted RBP13.96□□□□□ -0.17
DDX41-208ENST00000507955 TPD52L3Q96J77 140 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 TPT1P8Q9HAU6 139 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 CHCHD3Q9NX63 227 aaKnown RBP13.96□□□□□ -0.17
DDX41-208ENST00000507955 TMEM9Q9P0T7 183 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 SLC23A2Q9UGH3 650 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 KCNE2Q9Y6J6 123 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 TBC1D3BA6NDS4 549 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 ZSCAN9O15535 394 aaPredicted RBP13.95□□□□□ -0.18
DDX41-208ENST00000507955 ABCB7O75027 752 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 EPN2O95208 641 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 TNFRSF1BP20333 461 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 EPHA2P29317 976 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 PLA2G16P53816 162 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 C21orf59P57076 290 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 CSTF3Q12996 717 aaKnown RBP13.95□□□□□ -0.18
DDX41-208ENST00000507955 COL9A2Q14055 689 aaPredicted RBP13.95□□□□□ -0.18
DDX41-208ENST00000507955 SIM2Q14190 667 aaPredicted RBP13.95□□□□□ -0.18
DDX41-208ENST00000507955 BROXQ5VW32 411 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 ARMCX6Q7L4S7 300 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 CYP4Z1Q86W10 505 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 ZNF557Q8N988 423 aaPredicted RBP13.95□□□□□ -0.18
DDX41-208ENST00000507955 OR5AR1Q8NGP9 310 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 CNDP2Q96KP4 475 aaKnown RBP13.95□□□□□ -0.18
DDX41-208ENST00000507955 TBC1D23Q9NUY8 699 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 RAPGEFL1Q9UHV5 662 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 TMEFF2Q9UIK5 374 aaPredicted RBP13.95□□□□□ -0.18
DDX41-208ENST00000507955 HCN2Q9UL51 889 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 RUVBL1Q9Y265 456 aaKnown RBP13.95□□□□□ -0.18
DDX41-208ENST00000507955 MGAT4DA6NG13 374 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 ZNF197O14709 1029 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 SCAMP2O15127 329 aaKnown RBP13.95□□□□□ -0.18
DDX41-208ENST00000507955 LATO43561 262 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 FKBP9O95302 570 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 PRNPP04156 253 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 HOXA9P31269 272 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 IL12RB1P42701 662 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 CRYBA2P53672 197 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 TMBIM6P55061 237 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 TPD52P55327 224 aaPredicted RBP13.95□□□□□ -0.18
DDX41-208ENST00000507955 TAP2Q03519 686 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 AQP6Q13520 282 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 KCNC3Q14003 757 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 PRSS53Q2L4Q9 553 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 VMACQ2NL98 169 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 CPTPQ5TA50 214 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 FKBP9P1Q75LS8 142 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 ATL1Q8WXF7 558 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 ITFG2Q969R8 447 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 LRIG1Q96JA1 1093 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 FCRL1Q96LA6 429 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 TBCCD1Q9NVR7 557 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 ACSL6Q9UKU0 697 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 FZD4Q9ULV1 537 aa13.95□□□□□ -0.18
DDX41-208ENST00000507955 PTGES3LE9PB15 166 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 SCAMP1O15126 338 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 OPN1SWP03999 348 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 EPHX1P07099 455 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 IDSP22304 550 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 FSHRP23945 695 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 HNF4AP41235 474 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 SRSF11Q05519 484 aaKnown RBP13.94□□□□□ -0.18
DDX41-208ENST00000507955 COX20Q5RI15 118 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 DCDC5Q6ZRR9 648 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 GALNT13Q8IUC8 556 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 EID3Q8N140 333 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 NAGSQ8N159 534 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 ZCCHC7Q8N3Z6 543 aaKnown RBP13.94□□□□□ -0.18
DDX41-208ENST00000507955 TERB1Q8NA31 727 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 OR5AK3PQ8NH89 298 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 CNIH3Q8TBE1 160 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 CHTF18Q8WVB6 975 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 OR8D1Q8WZ84 308 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 PAK1IP1Q9NWT1 392 aaPredicted RBP13.94□□□□□ -0.18
DDX41-208ENST00000507955 HOXC11O43248 304 aaPredicted RBP13.94□□□□□ -0.18
DDX41-208ENST00000507955 PCDH7O60245 1069 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 MAN1A2O60476 641 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 UGDHO60701 494 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 ITGB7P26010 798 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 CCR3P51677 355 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 CD47Q08722 323 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 CNTN1Q12860 1018 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 MOGQ16653 247 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 CPZQ66K79 652 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 MED27Q6P2C8 311 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 GALNT18Q6P9A2 607 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 DCP2Q8IU60 420 aaKnown RBP13.94□□□□□ -0.18
DDX41-208ENST00000507955 ADHFE1Q8IWW8 467 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 C8orf59Q8N0T1 100 aaPredicted RBP13.94□□□□□ -0.18
DDX41-208ENST00000507955 OR8J2Q8NGG1 315 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 KLK6Q92876 244 aa13.94□□□□□ -0.18
DDX41-208ENST00000507955 FKBP10Q96AY3 582 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms