RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 DPH7Q9BTV6 452 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 CXorf56Q9H5V9 222 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 ZDHHC3Q9NYG2 299 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 IMPACTQ9P2X3 320 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 FBXW2Q9UKT8 454 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 PCDHA3Q9Y5H8 950 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 HEY1Q9Y5J3 304 aa6.7□□□□□ -1.34
VCAN-207ENST00000507162 MED12Q93074 2177 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 SCN3AQ9NY46 2000 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 A0A0A6YYK5 440 aaPredicted RBP6.69□□□□□ -1.34
VCAN-207ENST00000507162 A0A0G2JMM0 328 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 A0A0U1RQJ8 604 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 A0A1W2PPB8 328 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 A0A1W2PRS3 328 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 FEZF1A0PJY2 475 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 KIR3DP1A8MWS1 328 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 KDM4EB2RXH2 506 aaPredicted RBP6.69□□□□□ -1.34
VCAN-207ENST00000507162 CCL22O00626 93 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 EPHB6O15197 1021 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 GPRIN2O60269 458 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 VPS26AO75436 327 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 FKBP9O95302 570 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 FTLP02792 175 aaPredicted RBP6.69□□□□□ -1.34
VCAN-207ENST00000507162 CYC1P08574 325 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 CDK11BP21127 795 aaKnown RBP6.69□□□□□ -1.34
VCAN-207ENST00000507162 CTSSP25774 331 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 PTPN3P26045 913 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 XIAPP98170 497 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 DPYSL3Q14195 570 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 SLC1A5Q15758 541 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 NDUFA9Q16795 377 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 DNAJC21Q5F1R6 531 aaKnown RBP6.69□□□□□ -1.34
VCAN-207ENST00000507162 NDUFAF5Q5TEU4 345 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 GARNL3Q5VVW2 1013 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 IL20RBQ6UXL0 311 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 KIAA0408Q6ZU52 694 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 MICALCLQ6ZW33 695 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 RNF44Q7L0R7 432 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 SNX20Q7Z614 316 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 SERPINA9Q86WD7 417 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.69□□□□□ -1.34
VCAN-207ENST00000507162 FAM109AQ8N4B1 249 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 PSD4Q8NDX1 1056 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 IPMKQ8NFU5 416 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 OR2L3Q8NG85 312 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 OR13C4Q8NGS5 318 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 SLC22A8Q8TCC7 542 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 MCOLN3Q8TDD5 553 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 TSLPQ969D9 159 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 PIGQQ9BRB3 760 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 ACAT2Q9BWD1 397 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 RBCK1Q9BYM8 510 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 RBSNQ9H1K0 784 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 C12orf65Q9H3J6 166 aaKnown RBP6.69□□□□□ -1.34
VCAN-207ENST00000507162 SMARCAL1Q9NZC9 954 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 SPRR3Q9UBC9 169 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 PRSS21Q9Y6M0 314 aa6.69□□□□□ -1.34
VCAN-207ENST00000507162 SLC5A10A0PJK1 596 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 A8MVJ9 347 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 AHRRA9YTQ3 701 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 SGK494L7N484 410 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 SIAH2O43255 324 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 CTIFO43310 598 aaKnown RBP6.68□□□□□ -1.34
VCAN-207ENST00000507162 ERN1O75460 977 aaKnown RBP6.68□□□□□ -1.34
VCAN-207ENST00000507162 ITGA10O75578 1167 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 GLSO94925 669 aaPredicted RBP6.68□□□□□ -1.34
VCAN-207ENST00000507162 EPPINO95925 133 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 PGRP06401 933 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 GSTM1P09488 218 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 PRSS56P0CW18 603 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 SRD5A1P18405 259 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 CNR1P21554 472 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 ACRV1P26436 265 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 CMPK1P30085 196 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 OPRM1P35372 400 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 THBS2P35442 1172 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 IDUAP35475 653 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 TIMP3P35625 211 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 ARHGAP25P42331 645 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 ADARP55265 1226 aaKnown RBP6.68□□□□□ -1.34
VCAN-207ENST00000507162 SNRPNP63162 240 aaKnown RBP6.68□□□□□ -1.34
VCAN-207ENST00000507162 GSTM4Q03013 218 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 HYAL2Q12891 473 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 FAM53BQ14153 422 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 PIGHQ14442 188 aaPredicted RBP6.68□□□□□ -1.34
VCAN-207ENST00000507162 TAF1AQ15573 450 aaPredicted RBP6.68□□□□□ -1.34
VCAN-207ENST00000507162 SLC14A2Q15849 920 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 ZNF750Q32MQ0 723 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 FAM174BQ3ZCQ3 159 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 TEX44Q53QW1 395 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 C6orf52Q5T4I8 152 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 TTC23LQ6PF05 361 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 GK5Q6ZS86 529 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 IL17RELQ6ZVW7 336 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 PRSS41Q7RTY9 318 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 LIX1Q8N485 282 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 PQLC3Q8N755 202 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 ARIH2OSQ8N7S6 290 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 PLPP5Q8NEB5 264 aa6.68□□□□□ -1.34
VCAN-207ENST00000507162 SREK1Q8WXA9 508 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms