RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 NDUFAF7Q7L592 441 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 MAATS1Q7Z4T9 603 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 ASPGQ86U10 573 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 CUZD1Q86UP6 607 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 PDSS2Q86YH6 399 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 CEP97Q8IW35 865 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 SHISA5Q8N114 240 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 C17orf53Q8N3J3 647 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 AFAP1L2Q8N4X5 818 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 NKAPQ8N5F7 415 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 KCT2Q8NC54 265 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 CAMKVQ8NCB2 501 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 PYROXD1Q8WU10 500 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 ANKRD49Q8WVL7 239 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 NEIL2Q969S2 332 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 SNRNP40Q96DI7 357 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 C19orf60Q96EN9 201 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 THOC3Q96J01 351 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 AGAP4Q96P64 663 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 LMF1Q96S06 567 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 MACROD1Q9BQ69 325 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 TRIM54Q9BYV2 358 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 PHACTR1Q9C0D0 580 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 VN1R1Q9GZP7 353 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 DPH5Q9H2P9 285 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 POPDC3Q9HBV1 291 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 ZNF160Q9HCG1 818 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 VPS4AQ9UN37 437 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 CSAG2Q9Y5P2 127 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 SLC22A7Q9Y694 548 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 DOPEY1Q5JWR5 2465 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 NAV2Q8IVL1 2488 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 NSG1A0A0A6YYJ2 146 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 TCRBV9S1A1TA0A576 114 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 PABPN1LA6NDY0 278 aaKnown RBP8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 NPEPPSL1A6NEC2 478 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 FAM159BA6NKW6 160 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 CYSRT1A8MQ03 144 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 TCP11X1B4DZS4 312 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 JRKO75564 520 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 PIAS1O75925 651 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 KLHL18O94889 574 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 GUCA1CO95843 209 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 SERPINA7P05543 415 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 HEXBP07686 556 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 SLC35G6P0C7Q6 338 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 CXCR2P25025 360 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 SSTR1P30872 391 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 CASQ1P31415 396 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 GRK3P35626 688 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 SCTRP47872 440 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 CCR8P51685 355 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 GPX6P59796 221 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 REEP5Q00765 189 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 POU4F1Q01851 419 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 MEF2AQ02078 507 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 C2orf54Q08AI8 447 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 CALCOCO2Q13137 446 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 MFAP5Q13361 173 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 PWP1Q13610 501 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 CATSPEREQ5SY80 951 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 IRAK1BP1Q5VVH5 260 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 FAAH2Q6GMR7 532 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 ISLR2Q6UXK2 745 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 SYT10Q6XYQ8 523 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 RIPOR1Q6ZS17 1223 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 ADAMTSL2Q86TH1 951 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 KBTBD2Q8IY47 623 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 KLHDC8AQ8IYD2 350 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 ZNF740Q8NDX6 193 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 OR51Q1Q8NH59 317 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 NT5CQ8TCD5 201 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 SLC13A3Q8WWT9 602 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 ALKBH8Q96BT7 664 aaKnown RBP8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 MOCOSQ96EN8 888 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 IMMP1LQ96LU5 166 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 GPR22Q99680 433 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 YIPF2Q9BWQ6 316 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 DERL2Q9GZP9 239 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 ILKAPQ9H0C8 392 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 ZNF700Q9H0M5 742 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 SPNS1Q9H2V7 528 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 PELI2Q9HAT8 420 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 SAYSD1Q9NPB0 183 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 RIC8BQ9NVN3 520 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 ASF1BQ9NVP2 202 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 MKL2Q9ULH7 1088 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 NTNG1Q9Y2I2 539 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 MTO1Q9Y2Z2 717 aaKnown RBP8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 OARD1Q9Y530 152 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 SCN3AQ9NY46 2000 aa8.58□□□□□ -1.04
PDLIM5-209ENST00000506632 CPAMD8Q8IZJ3 1885 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 CTAGE15A4D2H0 777 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 SGK494L7N484 410 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 OR1F1O43749 312 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 GALR3O60755 368 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 RDH16O75452 317 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 CBX6O95503 412 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 CELA2AP08217 269 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 GSTA2P09210 222 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms