RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 SELENOKQ9Y6D0 94 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 SNED1Q8TER0 1413 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 GLTPD2A6NH11 291 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 A8MVM7 634 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 E5RGE8 158 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 NPIPA3F8WFD2 350 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 H7C423 109 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 RTCAO00442 366 aaKnown RBP3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 IFIT3O14879 490 aaKnown RBP3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 ST8SIA3O43173 380 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 KIF5CO60282 957 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 SAP30O75446 220 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 SLU7O95391 586 aaKnown RBP3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 YES1P07947 543 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 SP9P0CG40 484 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 DLATP10515 647 aaKnown RBP3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 EEF2P13639 858 aaKnown RBP3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 DPEP1P16444 411 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 AADACP22760 399 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 RBMS1P29558 406 aaKnown RBP3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 SOAT1P35610 550 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 TSFMP43897 325 aaKnown RBP3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 CLDN17P56750 224 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 FOLH1Q04609 750 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 FASTKD1Q53R41 847 aaKnown RBP3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 NHSL2Q5HYW2 709 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 FGD3Q5JSP0 725 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 CES4AQ5XG92 561 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 MSANTD1Q6ZTZ1 278 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 CHMP1BQ7LBR1 199 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 PHLDB2Q86SQ0 1253 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 CATSPERDQ86XM0 798 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 GRK7Q8WTQ7 553 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 MOCOSQ96EN8 888 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 IWS1Q96ST2 819 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 ALKBH7Q9BT30 221 aaPredicted RBP3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 FGFBP2Q9BYJ0 223 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 DNAI2Q9GZS0 605 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 ZWILCHQ9H900 591 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 IARS2Q9NSE4 1012 aaKnown RBP3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 FBXL4Q9UKA2 621 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 PILRBQ9UKJ0 227 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 PA2G4Q9UQ80 394 aaKnown RBP3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 NSG2Q9Y328 171 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 KIAA1217Q5T5P2 1943 aa3.44□□□□□ -1.86
TOPBP1-204ENST00000505804 MEX3AA1L020 520 aaKnown RBP3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 NDUFAF8A1L188 74 aa3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 NTN3O00634 580 aaPredicted RBP3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 SORBS2O94875 1100 aaKnown RBP3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 GOT1P17174 413 aa3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 HNF4AP41235 474 aa3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 VEGFCP49767 419 aa3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 CYCSP99999 105 aaKnown RBP3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 SRSF9Q13242 221 aaKnown RBP eCLIP3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 CASC4Q6P4E1 433 aa3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 DHRS11Q6UWP2 260 aa3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 GPR141Q7Z602 305 aa3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 ANKRD23Q86SG2 305 aa3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 MEX3DQ86XN8 651 aaKnown RBP3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 CREBRFQ8IUR6 639 aa3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 C4orf19Q8IY42 314 aa3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 NUP37Q8NFH4 326 aa3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 OR5T2Q8NGG2 359 aa3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 C18orf12Q96KH6 178 aa3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 MCRIP2Q9BUT9 160 aaKnown RBP3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 HOXD1Q9GZZ0 328 aa3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 LSG1Q9H089 658 aaKnown RBP3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 UPF3AQ9H1J1 476 aaKnown RBP3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 B3GAT2Q9NPZ5 323 aa3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 SEPT10Q9P0V9 454 aa3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 THEGQ9P2T0 379 aa3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 ARMCX3Q9UH62 379 aaPredicted RBP3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 NCKAP1Q9Y2A7 1128 aa3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 HBS1LQ9Y450 684 aaKnown RBP3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 COLEC10Q9Y6Z7 277 aa3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 NPHP3Q7Z494 1330 aa3.43□□□□□ -1.86
TOPBP1-204ENST00000505804 A0A087WZ39 114 aa3.42□□□□□ -1.86
TOPBP1-204ENST00000505804 ANTXRLA6NF34 631 aa3.42□□□□□ -1.86
TOPBP1-204ENST00000505804 YDJCA8MPS7 323 aa3.42□□□□□ -1.86
TOPBP1-204ENST00000505804 MPTX1A8MV57 137 aa3.42□□□□□ -1.86
TOPBP1-204ENST00000505804 NPIPB9F8W1W9 429 aa3.42□□□□□ -1.86
TOPBP1-204ENST00000505804 SLC1A7O00341 560 aa3.42□□□□□ -1.86
TOPBP1-204ENST00000505804 SLC30A4O14863 429 aa3.42□□□□□ -1.86
TOPBP1-204ENST00000505804 CTDSPLO15194 276 aa3.42□□□□□ -1.86
TOPBP1-204ENST00000505804 MAGEB2O15479 319 aa3.42□□□□□ -1.86
TOPBP1-204ENST00000505804 MT-ND2P03891 347 aa3.42□□□□□ -1.86
TOPBP1-204ENST00000505804 HSP90AB1P08238 724 aaKnown RBP3.42□□□□□ -1.86
TOPBP1-204ENST00000505804 PIK3R1P27986 724 aa3.42□□□□□ -1.86
TOPBP1-204ENST00000505804 OR3A1P47881 315 aa3.42□□□□□ -1.86
TOPBP1-204ENST00000505804 HUNKP57058 714 aa3.42□□□□□ -1.86
TOPBP1-204ENST00000505804 BTG1P62324 171 aa3.42□□□□□ -1.86
TOPBP1-204ENST00000505804 ABRQ12979 859 aa3.42□□□□□ -1.86
TOPBP1-204ENST00000505804 FAM189A2Q15884 450 aa3.42□□□□□ -1.86
TOPBP1-204ENST00000505804 MTHFSDQ2M296 383 aaKnown RBP3.42□□□□□ -1.86
TOPBP1-204ENST00000505804 KRTAP27-1Q3LI81 207 aa3.42□□□□□ -1.86
TOPBP1-204ENST00000505804 TRIM65Q6PJ69 517 aa3.42□□□□□ -1.86
TOPBP1-204ENST00000505804 KIF6Q6ZMV9 814 aa3.42□□□□□ -1.86
TOPBP1-204ENST00000505804 COX8CQ7Z4L0 72 aa3.42□□□□□ -1.86
TOPBP1-204ENST00000505804 ANKRD46Q86W74 232 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms