RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 CDH24Q86UP0 819 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 ANKMY2Q8IV38 441 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 SIRT6Q8N6T7 355 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 CALML6Q8TD86 181 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 ALKBH8Q96BT7 664 aaKnown RBP12.43□□□□□ -0.42
DDX41-204ENST00000504807 AGAP4Q96P64 663 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 YIPF2Q9BWQ6 316 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 TRIM8Q9BZR9 551 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 TGIF2Q9GZN2 237 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 VN1R1Q9GZP7 353 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 DRC3Q9H069 523 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 CCDC177Q9NQR7 707 aaPredicted RBP12.43□□□□□ -0.42
DDX41-204ENST00000504807 SMYD2Q9NRG4 433 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 TMEM184CQ9NVA4 438 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 HCN3Q9P1Z3 774 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 PTGFRNQ9P2B2 879 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 COMMD10Q9Y6G5 202 aa12.43□□□□□ -0.42
DDX41-204ENST00000504807 KCNE1BA0A087WTH5 132 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 GOLGA6L10A0A0M3HER8 536 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 ZNF860A6NHJ4 632 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 C4orf51C9J302 202 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 SGK494L7N484 410 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 EIF3FO00303 357 aaPredicted RBP12.42□□□□□ -0.42
DDX41-204ENST00000504807 MAP2K7O14733 419 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 ZSCAN12O43309 604 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 CCNDBP1O95273 360 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 BMP10O95393 424 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 DRD2P14416 443 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 MFAP5Q13361 173 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 PPP1R3AQ16821 1122 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 C18orf21Q32NC0 220 aaPredicted RBP12.42□□□□□ -0.42
DDX41-204ENST00000504807 CATSPEREQ5SY80 951 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 GARNL3Q5VVW2 1013 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 UGT3A1Q6NUS8 523 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 SBSNQ6UWP8 590 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 FJX1Q86VR8 437 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 SLC26A11Q86WA9 606 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 GPATCH11Q8N954 259 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 ST6GALNAC3Q8NDV1 305 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 OR5T3Q8NGG3 340 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 ZCCHC10Q8TBK6 192 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 DNAJB14Q8TBM8 379 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 GRHL3Q8TE85 626 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 RERGQ96A58 199 aaPredicted RBP12.42□□□□□ -0.42
DDX41-204ENST00000504807 MVB12AQ96EY5 273 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 CNDP1Q96KN2 507 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 IMMP1LQ96LU5 166 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 TAAR6Q96RI8 345 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 MCMBPQ9BTE3 642 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 REPIN1Q9BWE0 567 aaKnown RBP12.42□□□□□ -0.42
DDX41-204ENST00000504807 RBCK1Q9BYM8 510 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 AICDAQ9GZX7 198 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 ZNF700Q9H0M5 742 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 PARVBQ9HBI1 364 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 MKL2Q9ULH7 1088 aa12.42□□□□□ -0.42
DDX41-204ENST00000504807 NSG1A0A0A6YYJ2 146 aa12.41□□□□□ -0.42
DDX41-204ENST00000504807 MAN1A2O60476 641 aa12.41□□□□□ -0.42
DDX41-204ENST00000504807 RDH16O75452 317 aa12.41□□□□□ -0.42
DDX41-204ENST00000504807 IPO13O94829 963 aaKnown RBP12.41□□□□□ -0.42
DDX41-204ENST00000504807 SEC31AO94979 1220 aaKnown RBP12.41□□□□□ -0.42
DDX41-204ENST00000504807 C8GP07360 202 aa12.41□□□□□ -0.42
DDX41-204ENST00000504807 GMPRP36959 345 aa12.41□□□□□ -0.42
DDX41-204ENST00000504807 DR1Q01658 176 aa12.41□□□□□ -0.42
DDX41-204ENST00000504807 ZNF169Q14929 603 aaPredicted RBP12.41□□□□□ -0.42
DDX41-204ENST00000504807 NAA25Q14CX7 972 aa12.41□□□□□ -0.42
DDX41-204ENST00000504807 ISLR2Q6UXK2 745 aa12.41□□□□□ -0.42
DDX41-204ENST00000504807 NDUFAF7Q7L592 441 aa12.41□□□□□ -0.42
DDX41-204ENST00000504807 CPAMD8Q8IZJ3 1885 aa12.41□□□□□ -0.42
DDX41-204ENST00000504807 OR56A3Q8NH54 315 aa12.41□□□□□ -0.42
DDX41-204ENST00000504807 ANKRD49Q8WVL7 239 aa12.41□□□□□ -0.42
DDX41-204ENST00000504807 NPAS2Q99743 824 aa12.41□□□□□ -0.42
DDX41-204ENST00000504807 TRIM31Q9BZY9 425 aa12.41□□□□□ -0.42
DDX41-204ENST00000504807 MKKSQ9NPJ1 570 aaPredicted RBP12.41□□□□□ -0.42
DDX41-204ENST00000504807 TAS2R13Q9NYV9 303 aa12.41□□□□□ -0.42
DDX41-204ENST00000504807 ZNF839A8K0R7 811 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 CDC7O00311 574 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 SEC24DO94855 1032 aaPredicted RBP12.4□□□□□ -0.42
DDX41-204ENST00000504807 NSA2O95478 260 aaKnown RBP12.4□□□□□ -0.42
DDX41-204ENST00000504807 TTC4O95801 387 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 SERPINA7P05543 415 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 HEXBP07686 556 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 TCP1P17987 556 aaKnown RBP12.4□□□□□ -0.42
DDX41-204ENST00000504807 TSFMP43897 325 aaKnown RBP12.4□□□□□ -0.42
DDX41-204ENST00000504807 RPL21P46778 160 aaKnown RBP12.4□□□□□ -0.42
DDX41-204ENST00000504807 GNG11P61952 73 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 RPS15AP62244 130 aaKnown RBP12.4□□□□□ -0.42
DDX41-204ENST00000504807 OLR1P78380 273 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 SP140Q13342 867 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 ART3Q13508 389 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 FAM53BQ14153 422 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 MORF4L2Q15014 288 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 ZNF324BQ6AW86 544 aaPredicted RBP12.4□□□□□ -0.42
DDX41-204ENST00000504807 FCRLBQ6BAA4 426 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 LCTLQ6UWM7 567 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 KIAA0408Q6ZU52 694 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 GALNT7Q86SF2 657 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 CEP97Q8IW35 865 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 KBTBD2Q8IY47 623 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 ZNF295-AS1Q8N0V1 137 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 MYO1HQ8N1T3 1032 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms