RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 CCNB1IP1Q9NPC3 277 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 FLRT1Q9NZU1 646 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 PCDHGB1Q9Y5G3 927 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 UNC80Q8N2C7 3258 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 H3BN98 237 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 CAPN5O15484 640 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-208ENST00000504387 SLC25A14O95258 325 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-208ENST00000504387 CELF2O95319 508 aaKnown RBP7.37□□□□□ -1.23
NEDD9-208ENST00000504387 OTCP00480 354 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 C9P02748 559 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 CYP17A1P05093 508 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 CDK1P06493 297 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 FCER2P06734 321 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 KIR2DL3P43628 341 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 INPP1P49441 399 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 RPS24P62847 133 aaKnown RBP7.37□□□□□ -1.23
NEDD9-208ENST00000504387 ZNF79Q15937 498 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 ZNF284Q2VY69 593 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 PARP15Q460N3 678 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 MS4A13Q5J8X5 152 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 LRRC73Q5JTD7 316 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 ZNF57Q68EA5 555 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-208ENST00000504387 CCSAPQ6IQ19 270 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-208ENST00000504387 AGMOQ6ZNB7 445 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 NKAPQ8N5F7 415 aaKnown RBP7.37□□□□□ -1.23
NEDD9-208ENST00000504387 LINC01465Q8N7H1 131 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 TSPEARQ8WU66 669 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 ASB15Q8WXK1 588 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 TRIM63Q969Q1 353 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 SH3KBP1Q96B97 665 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 PPP3R2Q96LZ3 170 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 NUSAP1Q9BXS6 441 aaKnown RBP7.37□□□□□ -1.23
NEDD9-208ENST00000504387 ZYG11BQ9C0D3 744 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 PPIL3Q9H2H8 161 aaKnown RBP7.37□□□□□ -1.23
NEDD9-208ENST00000504387 ELOVL6Q9H5J4 265 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 MRM3Q9HC36 420 aaKnown RBP7.37□□□□□ -1.23
NEDD9-208ENST00000504387 HEBP1Q9NRV9 189 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 ABCC13Q9NSE7 274 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 PSORS1C1Q9UIG5 152 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 ACSL6Q9UKU0 697 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 MKLN1Q9UL63 735 aa7.37□□□□□ -1.23
NEDD9-208ENST00000504387 PCDH17O14917 1159 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 ZNF780AO75290 641 aaPredicted RBP7.36□□□□□ -1.23
NEDD9-208ENST00000504387 ITGAMP11215 1152 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 COX7A2P14406 83 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 ENPP1P22413 925 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 GPC1P35052 558 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 KCNQ1P51787 676 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 PTPN5P54829 565 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 AIF1P55008 147 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 SRP54P61011 504 aaKnown RBP7.36□□□□□ -1.23
NEDD9-208ENST00000504387 PRKCDQ05655 676 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 KIAA0040Q15053 153 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 QPRTQ15274 297 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 EXOC3L2Q2M3D2 409 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 TYW3Q6IPR3 259 aaKnown RBP7.36□□□□□ -1.23
NEDD9-208ENST00000504387 ADNP2Q6IQ32 1131 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 LGI4Q8N135 537 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 FAM109AQ8N4B1 249 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 OR10G2Q8NGC3 310 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 OR4M1Q8NGD0 313 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 OR4K1Q8NGD4 311 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 C1GALT1C1Q96EU7 318 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 ZNF382Q96SR6 550 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 TCF25Q9BQ70 676 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 WACQ9BTA9 647 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 ACPTQ9BZG2 426 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 TRIM45Q9H8W5 580 aaPredicted RBP7.36□□□□□ -1.23
NEDD9-208ENST00000504387 TM9SF3Q9HD45 589 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 ZNF222Q9UK12 451 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 PADI3Q9ULW8 664 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 SAMD4AQ9UPU9 718 aaKnown RBP7.36□□□□□ -1.23
NEDD9-208ENST00000504387 POLHQ9Y253 713 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 PCDHB9Q9Y5E1 797 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 LTBP3Q9NS15 1303 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 TRAV6A0A075B6T7 132 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 FAM240BA0A1B0GVZ2 78 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 C2orf81A6NN90 581 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 B4DXG7 233 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 ARNTLO00327 626 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 SAP18O00422 153 aaKnown RBP7.36□□□□□ -1.23
NEDD9-208ENST00000504387 FGF10O15520 208 aaPredicted RBP7.36□□□□□ -1.23
NEDD9-208ENST00000504387 ESR1P03372 595 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 KCNE1P15382 129 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 CPT1AP50416 773 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 HSPA14Q0VDF9 509 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 FAPQ12884 760 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 KRR1Q13601 381 aaKnown RBP7.36□□□□□ -1.23
NEDD9-208ENST00000504387 INSL4Q14641 139 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 YIF1BQ5BJH7 314 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 WDR53Q7Z5U6 358 aaPredicted RBP7.36□□□□□ -1.23
NEDD9-208ENST00000504387 GRAMD2AQ8IUY3 354 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 PHC2Q8IXK0 858 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 TMCO6Q96DC7 493 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 PKP4Q99569 1192 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 BCL7BQ9BQE9 202 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 CPPED1Q9BRF8 314 aaPredicted RBP7.36□□□□□ -1.23
NEDD9-208ENST00000504387 GPR63Q9BZJ6 419 aa7.36□□□□□ -1.23
NEDD9-208ENST00000504387 POLR2J2Q9GZM3 115 aaKnown RBP7.36□□□□□ -1.23
NEDD9-208ENST00000504387 MARCH2Q9P0N8 246 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms