RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 DNAJC28Q9NX36 388 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ARL15Q9NXU5 204 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 VTI1BQ9UEU0 232 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 FBXO5Q9UKT4 447 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 TPRKBQ9Y3C4 175 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 A0A1W2PN81 502 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 DHRS12A0PJE2 317 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 LCHNA4D1U4 455 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 G3V3Q6 166 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 MEIS2O14770 477 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 HRO43593 1189 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 EFCAB14O75071 495 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 TRIM3O75382 744 aaPredicted RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 NOL4O94818 638 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC25A27O95847 323 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 APOC1P02654 83 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 FGF4P08620 206 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 TSPAN19P0C672 248 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 NR2F1P10589 423 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ITGB5P18084 799 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 LBPP18428 481 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 PGAM1P18669 254 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 TBXA2RP21731 343 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 TACR3P29371 465 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 IL12AP29459 219 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 CHRNA7P36544 502 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ADCYAP1R1P41586 468 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 RFX2P48378 723 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 VASPP50552 380 aaPredicted RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 CCR4P51679 360 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 DGKQP52824 942 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 PTTG1IPP53801 180 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 RAB25P57735 213 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 PCDH1Q08174 1060 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ACSM2AQ08AH3 577 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 STX4Q12846 297 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 PGM5Q15124 567 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 DPYSL2Q16555 572 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 CCL14Q16627 93 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 MINDY4Q4G0A6 757 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 INTS6LQ5JSJ4 861 aaKnown RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ACSM2BQ68CK6 577 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 DPY19L2P1Q6NXN4 242 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ZFP1Q6P2D0 407 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 FAM183BPQ6ZVS7 135 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 DEFB128Q7Z7B8 93 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ADGRG3Q86Y34 549 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 GPSM1Q86YR5 675 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 FAM71AQ8IYT1 594 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 KATNAL2Q8IYT4 538 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 UNC5BQ8IZJ1 945 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 LNX2Q8N448 690 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 CBR4Q8N4T8 237 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF321PQ8N8H1 164 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 OR10Q1Q8NGQ4 319 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 TADA1Q96BN2 335 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 REPS1Q96D71 796 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 MISP3Q96FF7 219 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 OR1F2PQ96R84 312 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 GFM1Q96RP9 751 aaKnown RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 MYOCQ99972 504 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 FEM1AQ9BSK4 669 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 GPR61Q9BZJ8 451 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 CRISPLD2Q9H0B8 497 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ENKD1Q9H0I2 346 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 CLEC4MQ9H2X3 399 aaPredicted RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 OR51B6Q9H340 312 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 REEP1Q9H902 201 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 GPN2Q9H9Y4 310 aaPredicted RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 RPRD1BQ9NQG5 326 aaKnown RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 CHRAC1Q9NRG0 131 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 PLSCR4Q9NRQ2 329 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 CMTM6Q9NX76 183 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 THUMPD1Q9NXG2 353 aaKnown RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 NPAP1Q9NZP6 1156 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 NFKBIL1Q9UBC1 381 aaPredicted RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF639Q9UID6 485 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF222Q9UK12 451 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 LIPT1Q9Y234 373 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 VPS9D1Q9Y2B5 631 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 hCG_1818297A0A087WSY0 165 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 A0A0G2JLL6 359 aaPredicted RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 CENPXA8MT69 81 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 FAM220BPB1ANY3 271 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 NPIPB8E9PQR5 432 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 RBAK-RBAKDNI3L0D1 243 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 MYL12BO14950 172 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 ADAMDEC1O15204 470 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 FKTNO75072 461 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 CCNKO75909 580 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 VAMP5O95183 116 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 METTL18O95568 372 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 FADS2O95864 444 aaKnown RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 TOP3BO95985 862 aaKnown RBP3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 F2P00734 622 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 IFNGP01579 166 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 FCER2P06734 321 aa3.56□□□□□ -1.84
PCDH11X-208ENST00000504220 CLTBP09497 229 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms