RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 TMEM156Q8N614 296 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 TNIP2Q8NFZ5 429 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 OR2M7Q8NG81 312 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 OR2A1Q8NGT9 310 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.66□□□□□ -0.54
LSM6-204ENST00000504181 RAPGEF5Q92565 580 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 CAPZA3Q96KX2 299 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 ACAT2Q9BWD1 397 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 RAB11FIP5Q9BXF6 653 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 HAUS4Q9H6D7 363 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 KCMF1Q9P0J7 381 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 KLHL8Q9P2G9 620 aaPredicted RBP11.66□□□□□ -0.54
LSM6-204ENST00000504181 EIF3LQ9Y262 564 aaKnown RBP11.66□□□□□ -0.54
LSM6-204ENST00000504181 DRG1Q9Y295 367 aaKnown RBP11.66□□□□□ -0.54
LSM6-204ENST00000504181 NPFFR2Q9Y5X5 522 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 MED12LQ86YW9 2145 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 A0A1B0GVC2 190 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 APOL1O14791 398 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 CRTAMO95727 393 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 CELA3AP09093 270 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 FAM157CP0CG43 387 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 GABRA1P14867 456 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 KDELR1P24390 212 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 CMPK1P30085 196 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 DYNLT1P63172 113 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 PLOD1Q02809 727 aaPredicted RBP11.65□□□□□ -0.54
LSM6-204ENST00000504181 WASHC5Q12768 1159 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 FAM53BQ14153 422 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 CAPRIN1Q14444 709 aaKnown RBP11.65□□□□□ -0.54
LSM6-204ENST00000504181 TYSND1Q2T9J0 566 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 SLC9A4Q6AI14 798 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 POMZP3Q6PJE2 187 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 PIANPQ8IYJ0 282 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 SLC22A15Q8IZD6 547 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 PSD4Q8NDX1 1056 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 RERGQ96A58 199 aaPredicted RBP11.65□□□□□ -0.54
LSM6-204ENST00000504181 SARAFQ96BY9 339 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 FCRL5Q96RD9 977 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 APOL2Q9BQE5 337 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 GSX2Q9BZM3 304 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 LDAHQ9H6V9 325 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 EXO5Q9H790 373 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 TIMMDC1Q9NPL8 285 aa11.65□□□□□ -0.54
LSM6-204ENST00000504181 A0A1W2PPV9 198 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 FEZF1A0PJY2 475 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 SH3D21A4FU49 640 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 KDM4EB2RXH2 506 aaPredicted RBP11.64□□□□□ -0.55
LSM6-204ENST00000504181 EEF1E1-BLOC1S5C9J1V9 151 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 RNF223E7ERA6 249 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 G3V3Y1 287 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 H0YIG0 161 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 MYO1FO00160 1098 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 EEF1E1O43324 174 aaKnown RBP11.64□□□□□ -0.55
LSM6-204ENST00000504181 TLX2O43763 284 aaPredicted RBP11.64□□□□□ -0.55
LSM6-204ENST00000504181 HOXB1P14653 301 aaPredicted RBP11.64□□□□□ -0.55
LSM6-204ENST00000504181 FPR1P21462 350 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 BDKRB1P46663 353 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 RHAGQ02094 409 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 HSPA14Q0VDF9 509 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 ACKR1Q16570 336 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 NDUFA9Q16795 377 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 CCSMST1Q4G0I0 132 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 RGS9BPQ6ZS82 235 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 PID1Q7Z2X4 250 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 ZNF567Q8N184 647 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 FAM109AQ8N4B1 249 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 TMEM251Q8N6I4 163 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 DNAJC1Q96KC8 554 aaKnown RBP11.64□□□□□ -0.55
LSM6-204ENST00000504181 OR2A5Q96R48 311 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 DEFB126Q9BYW3 111 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 ISCUQ9H1K1 167 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 PCDHA3Q9Y5H8 950 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 ROS1P08922 2347 aa11.64□□□□□ -0.55
LSM6-204ENST00000504181 ATP6AP2A0A1C7CYW4 349 aa11.63□□□□□ -0.55
LSM6-204ENST00000504181 LRRD1A4D1F6 860 aa11.63□□□□□ -0.55
LSM6-204ENST00000504181 SGK494L7N484 410 aa11.63□□□□□ -0.55
LSM6-204ENST00000504181 CD5LO43866 347 aa11.63□□□□□ -0.55
LSM6-204ENST00000504181 ATP6AP2O75787 350 aa11.63□□□□□ -0.55
LSM6-204ENST00000504181 NSA2O95478 260 aaKnown RBP11.63□□□□□ -0.55
LSM6-204ENST00000504181 OR56A5P0C7T3 313 aa11.63□□□□□ -0.55
LSM6-204ENST00000504181 TPH1P17752 444 aa11.63□□□□□ -0.55
LSM6-204ENST00000504181 IL1RNP18510 177 aa11.63□□□□□ -0.55
LSM6-204ENST00000504181 ENDOUP21128 410 aaKnown RBP11.63□□□□□ -0.55
LSM6-204ENST00000504181 AGFG1P52594 562 aaKnown RBP11.63□□□□□ -0.55
LSM6-204ENST00000504181 ZNF136P52737 540 aa11.63□□□□□ -0.55
LSM6-204ENST00000504181 NAA25Q14CX7 972 aa11.63□□□□□ -0.55
LSM6-204ENST00000504181 MAATS1Q7Z4T9 603 aa11.63□□□□□ -0.55
LSM6-204ENST00000504181 CYP4X1Q8N118 509 aa11.63□□□□□ -0.55
LSM6-204ENST00000504181 PLPP5Q8NEB5 264 aa11.63□□□□□ -0.55
LSM6-204ENST00000504181 DACH2Q96NX9 599 aa11.63□□□□□ -0.55
LSM6-204ENST00000504181 EPB41L4BQ9H329 900 aa11.63□□□□□ -0.55
LSM6-204ENST00000504181 MRPS30Q9NP92 439 aaKnown RBP11.63□□□□□ -0.55
LSM6-204ENST00000504181 C6orf203Q9P0P8 240 aaPredicted RBP11.63□□□□□ -0.55
LSM6-204ENST00000504181 SPRR3Q9UBC9 169 aa11.63□□□□□ -0.55
LSM6-204ENST00000504181 ZNF629Q9UEG4 869 aaPredicted RBP11.63□□□□□ -0.55
LSM6-204ENST00000504181 PCYOX1Q9UHG3 505 aa11.63□□□□□ -0.55
LSM6-204ENST00000504181 ERVK-11Q9UQG0 969 aa11.63□□□□□ -0.55
LSM6-204ENST00000504181 C2orf72A6NCS6 295 aa11.62□□□□□ -0.55
LSM6-204ENST00000504181 LRRC53A6NM62 1247 aa11.62□□□□□ -0.55
LSM6-204ENST00000504181 MAGEB17A8MXT2 336 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms