RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 E7ESA3 106 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 INPPL1O15357 1258 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 ZNF20P17024 532 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 TCEA1P23193 301 aaKnown RBP16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 GGT5P36269 586 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 CDH15P55291 814 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 IQCF2Q8IXL9 164 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 OR52E4Q8NGH9 312 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 EZH1Q92800 747 aaPredicted RBP16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 NKD1Q969G9 470 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 SPATA9Q9BWV2 254 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 BTBD1Q9H0C5 482 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 TRIM36Q9NQ86 728 aa16.03■□□□□ 0.16
PCDHA1-203ENST00000504120 A0A0D9SEW6 157 aa16.02■□□□□ 0.16
PCDHA1-203ENST00000504120 PFKMP08237 780 aa16.02■□□□□ 0.16
PCDHA1-203ENST00000504120 OR2B6P58173 313 aa16.02■□□□□ 0.16
PCDHA1-203ENST00000504120 ZNF763Q0D2J5 394 aa16.02■□□□□ 0.16
PCDHA1-203ENST00000504120 PUS10Q3MIT2 529 aaKnown RBP16.02■□□□□ 0.16
PCDHA1-203ENST00000504120 EOGTQ5NDL2 527 aa16.02■□□□□ 0.16
PCDHA1-203ENST00000504120 SLC29A4Q7RTT9 530 aa16.02■□□□□ 0.16
PCDHA1-203ENST00000504120 OTUB2Q96DC9 234 aa16.02■□□□□ 0.16
PCDHA1-203ENST00000504120 ERMAPQ96PL5 475 aaPredicted RBP16.02■□□□□ 0.16
PCDHA1-203ENST00000504120 LYARQ9NX58 379 aaKnown RBP16.02■□□□□ 0.16
PCDHA1-203ENST00000504120 PEPDP12955 493 aa16.02■□□□□ 0.16
PCDHA1-203ENST00000504120 DGKEP52429 567 aa16.02■□□□□ 0.16
PCDHA1-203ENST00000504120 DCDC1P59894 354 aa16.02■□□□□ 0.16
PCDHA1-203ENST00000504120 TUBA3EQ6PEY2 450 aa16.02■□□□□ 0.16
PCDHA1-203ENST00000504120 RHEBL1Q8TAI7 183 aa16.02■□□□□ 0.16
PCDHA1-203ENST00000504120 TRIB3Q96RU7 358 aa16.02■□□□□ 0.16
PCDHA1-203ENST00000504120 MKS1Q9NXB0 559 aa16.02■□□□□ 0.16
PCDHA1-203ENST00000504120 ZNF726A6NNF4 738 aa16.02■□□□□ 0.15
PCDHA1-203ENST00000504120 SCDO00767 359 aa16.02■□□□□ 0.15
PCDHA1-203ENST00000504120 BMP8BP34820 402 aa16.02■□□□□ 0.15
PCDHA1-203ENST00000504120 KIAA1614Q5VZ46 1190 aa16.02■□□□□ 0.15
PCDHA1-203ENST00000504120 RPS27LQ71UM5 84 aaKnown RBP16.02■□□□□ 0.15
PCDHA1-203ENST00000504120 BMP8AQ7Z5Y6 402 aa16.02■□□□□ 0.15
PCDHA1-203ENST00000504120 SDR16C5Q8N3Y7 309 aa16.02■□□□□ 0.15
PCDHA1-203ENST00000504120 HCAR2Q8TDS4 363 aa16.02■□□□□ 0.15
PCDHA1-203ENST00000504120 MNTQ99583 582 aa16.02■□□□□ 0.15
PCDHA1-203ENST00000504120 A0A1W2PRQ8 180 aa16.02■□□□□ 0.15
PCDHA1-203ENST00000504120 ARL6IP5O75915 188 aa16.02■□□□□ 0.15
PCDHA1-203ENST00000504120 FGF18O76093 207 aa16.02■□□□□ 0.15
PCDHA1-203ENST00000504120 HLA-DPB1P04440 258 aa16.02■□□□□ 0.15
PCDHA1-203ENST00000504120 RPL10P27635 214 aaKnown RBP16.02■□□□□ 0.15
PCDHA1-203ENST00000504120 TPTEP56180 551 aa16.02■□□□□ 0.15
PCDHA1-203ENST00000504120 NFATC2Q13469 925 aa16.02■□□□□ 0.15
PCDHA1-203ENST00000504120 GFOD2Q3B7J2 385 aa16.02■□□□□ 0.15
PCDHA1-203ENST00000504120 FAM46DQ8NEK8 389 aa16.02■□□□□ 0.15
PCDHA1-203ENST00000504120 OR2L3Q8NG85 312 aa16.02■□□□□ 0.15
PCDHA1-203ENST00000504120 C16orf70Q9BSU1 422 aa16.02■□□□□ 0.15
PCDHA1-203ENST00000504120 NDC1Q9BTX1 674 aa16.02■□□□□ 0.15
PCDHA1-203ENST00000504120 RBMX2Q9Y388 322 aaKnown RBP16.02■□□□□ 0.15
PCDHA1-203ENST00000504120 C6orf47O95873 294 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 PDX1P52945 283 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 CYBRD1Q53TN4 286 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 RDH12Q96NR8 316 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 EDNRAP25101 427 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 PTPRCAPQ14761 206 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 RANBP9Q96S59 729 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 TMEM9Q9P0T7 183 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 HCN4Q9Y3Q4 1203 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 C5P01031 1676 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 CAPN14A8MX76 684 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 SLC16A5O15375 505 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 GRID2O43424 1007 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 INMTO95050 263 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 OR3A3P47888 321 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 OR3A2P47893 321 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 C6orf136Q5SQH8 315 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 LY6G5CQ5SRR4 150 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 LIPJQ5W064 366 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 OR8J3Q8NGG0 315 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 SEC14L1Q92503 715 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 CD180Q99467 661 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 MEMO1Q9Y316 297 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 H3BSA7 217 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 COCHO43405 550 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 AGXTP21549 392 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 MATN1P21941 496 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 ADAM17P78536 824 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 TMEM115Q12893 351 aaPredicted RBP16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 TSTQ16762 297 aaKnown RBP16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 TPRG1LQ5T0D9 272 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 ANO7Q6IWH7 933 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 REEP3Q6NUK4 255 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 CYS1Q717R9 158 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 OR4E2Q8NGC2 313 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 C1orf216Q8TAB5 229 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 CCDC107Q8WV48 283 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 ACOT12Q8WYK0 555 aa16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 ADAD1Q96M93 576 aaKnown RBP16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 FBRSL1Q9HCM7 1045 aaKnown RBP16.01■□□□□ 0.15
PCDHA1-203ENST00000504120 COL2A1P02458 1487 aaPredicted RBP16■□□□□ 0.15
PCDHA1-203ENST00000504120 CHP2O43745 196 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 RAB36O95755 333 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 ADH1BP00325 375 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 CCL5P13501 91 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 CD72P21854 359 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 ACADVLP49748 655 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms