RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 LOC102723996A0A087X1L8 192 aa18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 RDH16O75452 317 aa18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 XCR1P46094 333 aa18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 CCR8P51685 355 aa18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 MGAT5Q09328 741 aa18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 ZXDCQ2QGD7 858 aaPredicted RBP18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 HIST2H2BCQ6DN03 193 aa18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 STRA8Q7Z7C7 330 aa18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 SHISA5Q8N114 240 aa18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 AMER2Q8N7J2 671 aa18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 MFSD9Q8NBP5 474 aa18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 OR56A3Q8NH54 315 aa18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 GRHL3Q8TE85 626 aa18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 ATL1Q8WXF7 558 aa18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 PSMF1Q92530 271 aa18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 FBXL8Q96CD0 374 aa18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 TM4SF19Q96DZ7 209 aa18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 KRT12Q99456 494 aa18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 BARD1Q99728 777 aaKnown RBP18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 PLA2G3Q9NZ20 509 aa18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 PLEKHB1Q9UF11 243 aaPredicted RBP18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 IKZF3Q9UKT9 509 aa18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 PSAT1Q9Y617 370 aa18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 CPAMD8Q8IZJ3 1885 aa18.39■□□□□ 0.53
UBE2D3-215ENST00000503418 MAST4O15021 2626 aa18.38■□□□□ 0.53
UBE2D3-215ENST00000503418 UTP20O75691 2785 aaKnown RBP18.38■□□□□ 0.53
UBE2D3-215ENST00000503418 A1L4Q6 167 aa18.38■□□□□ 0.53
UBE2D3-215ENST00000503418 NDUFS4O43181 175 aa18.38■□□□□ 0.53
UBE2D3-215ENST00000503418 OR1F1O43749 312 aa18.38■□□□□ 0.53
UBE2D3-215ENST00000503418 SERPIND1P05546 499 aa18.38■□□□□ 0.53
UBE2D3-215ENST00000503418 ENO2P09104 434 aaPredicted RBP18.38■□□□□ 0.53
UBE2D3-215ENST00000503418 ITGAMP11215 1152 aa18.38■□□□□ 0.53
UBE2D3-215ENST00000503418 SOX11P35716 441 aa18.38■□□□□ 0.53
UBE2D3-215ENST00000503418 ZNF460Q14592 562 aa18.38■□□□□ 0.53
UBE2D3-215ENST00000503418 RIPOR1Q6ZS17 1223 aa18.38■□□□□ 0.53
UBE2D3-215ENST00000503418 LANCL3Q6ZV70 420 aa18.38■□□□□ 0.53
UBE2D3-215ENST00000503418 ST6GALNAC3Q8NDV1 305 aa18.38■□□□□ 0.53
UBE2D3-215ENST00000503418 OR1N1Q8NGS0 311 aa18.38■□□□□ 0.53
UBE2D3-215ENST00000503418 MAGEB10Q96LZ2 347 aaPredicted RBP18.38■□□□□ 0.53
UBE2D3-215ENST00000503418 OR4K3Q96R72 315 aa18.38■□□□□ 0.53
UBE2D3-215ENST00000503418 TUBB6Q9BUF5 446 aa18.38■□□□□ 0.53
UBE2D3-215ENST00000503418 RBCK1Q9BYM8 510 aa18.38■□□□□ 0.53
UBE2D3-215ENST00000503418 FAM129AQ9BZQ8 928 aa18.38■□□□□ 0.53
UBE2D3-215ENST00000503418 ERRFI1Q9UJM3 462 aaPredicted RBP18.38■□□□□ 0.53
UBE2D3-215ENST00000503418 SNX24Q9Y343 169 aa18.38■□□□□ 0.53
UBE2D3-215ENST00000503418 NAALAD2Q9Y3Q0 740 aa18.38■□□□□ 0.53
UBE2D3-215ENST00000503418 SCN2AQ99250 2005 aa18.38■□□□□ 0.53
UBE2D3-215ENST00000503418 IGHV3-20A0A0C4DH32 117 aa18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 FAM95CA0A1B0GW59 222 aa18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 NPEPPSL1A6NEC2 478 aa18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 OR2W5A6NFC9 320 aa18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 ZNF860A6NHJ4 632 aa18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 SEC24DO94855 1032 aaPredicted RBP18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 F10P00742 488 aa18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 ICAM2P13598 275 aa18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 ZNF37AP17032 561 aaPredicted RBP18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 RPL21P46778 160 aaKnown RBP18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 AP2B1P63010 937 aa18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 MRPS25P82663 173 aaKnown RBP18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 FRG1Q14331 258 aaKnown RBP18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 CSHL1Q14406 222 aa18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 CATSPEREQ5SY80 951 aa18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 FAM180AQ6UWF9 173 aa18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 SBSNQ6UWP8 590 aa18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 TMEM207Q6UWW9 146 aa18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 CAPN12Q6ZSI9 719 aa18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 ZC3HC1Q86WB0 502 aaKnown RBP18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 PDSS2Q86YH6 399 aa18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 ZBED8Q8IZ13 594 aa18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 TBC1D19Q8N5T2 526 aa18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 ABHD11Q8NFV4 315 aa18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 TSNARE1Q96NA8 513 aa18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 CYTH2Q99418 400 aa18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 C19orf25Q9UFG5 118 aaPredicted RBP18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 SVILO95425 2214 aa18.37■□□□□ 0.53
UBE2D3-215ENST00000503418 TRBC2A0A5B9 178 aa18.36■□□□□ 0.53
UBE2D3-215ENST00000503418 CDC7O00311 574 aa18.36■□□□□ 0.53
UBE2D3-215ENST00000503418 TP73O15350 636 aa18.36■□□□□ 0.53
UBE2D3-215ENST00000503418 CDC123O75794 336 aaPredicted RBP18.36■□□□□ 0.53
UBE2D3-215ENST00000503418 DDAH2O95865 285 aa18.36■□□□□ 0.53
UBE2D3-215ENST00000503418 CPEB2Q7Z5Q1 589 aaKnown RBP18.36■□□□□ 0.53
UBE2D3-215ENST00000503418 NKAPQ8N5F7 415 aaKnown RBP18.36■□□□□ 0.53
UBE2D3-215ENST00000503418 ZNF740Q8NDX6 193 aa18.36■□□□□ 0.53
UBE2D3-215ENST00000503418 OR4K1Q8NGD4 311 aa18.36■□□□□ 0.53
UBE2D3-215ENST00000503418 FAR1Q8WVX9 515 aa18.36■□□□□ 0.53
UBE2D3-215ENST00000503418 SLC5A11Q8WWX8 675 aa18.36■□□□□ 0.53
UBE2D3-215ENST00000503418 NEIL2Q969S2 332 aa18.36■□□□□ 0.53
UBE2D3-215ENST00000503418 MOCOSQ96EN8 888 aa18.36■□□□□ 0.53
UBE2D3-215ENST00000503418 PEX11GQ96HA9 241 aa18.36■□□□□ 0.53
UBE2D3-215ENST00000503418 PDLIM5Q96HC4 596 aaKnown RBP18.36■□□□□ 0.53
UBE2D3-215ENST00000503418 PDLIM2Q96JY6 352 aa18.36■□□□□ 0.53
UBE2D3-215ENST00000503418 C5orf34Q96MH7 638 aa18.36■□□□□ 0.53
UBE2D3-215ENST00000503418 EGFL8Q99944 293 aa18.36■□□□□ 0.53
UBE2D3-215ENST00000503418 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.36■□□□□ 0.532e-8■■□□□ 14.3
UBE2D3-215ENST00000503418 RNF14Q9UBS8 474 aa18.36■□□□□ 0.53
UBE2D3-215ENST00000503418 SLC5A6Q9Y289 635 aa18.36■□□□□ 0.53
UBE2D3-215ENST00000503418 DYRK1BQ9Y463 629 aa18.36■□□□□ 0.53
UBE2D3-215ENST00000503418 SLC22A7Q9Y694 548 aa18.36■□□□□ 0.53
UBE2D3-215ENST00000503418 ZGRF1Q86YA3 2104 aa18.35■□□□□ 0.53
UBE2D3-215ENST00000503418 E7ESA3 106 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms