RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 ZNF433Q8N7K0 673 aaPredicted RBP16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 AIF1LQ9BQI0 150 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 DOHHQ9BU89 302 aa16.69■□□□□ 0.26
HMGXB3-201ENST00000502717 CBSLP0DN79 551 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 CBSP35520 551 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 RPL4P36578 427 aaKnown RBP16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 NPAS3Q8IXF0 933 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 DEDD2Q8WXF8 326 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 AP2M1Q96CW1 435 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 GORASP2Q9H8Y8 452 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 TMEM248Q9NWD8 314 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 DNAJC27Q9NZQ0 273 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 UBQLN2Q9UHD9 624 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 GTF2IRD1Q9UHL9 959 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 MGAT4BQ9UQ53 548 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 CLCA3PQ9Y6N3 262 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 TLX2O43763 284 aaPredicted RBP16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 RGS8P57771 180 aaPredicted RBP16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 SPHARQ15513 63 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 MEDAGQ5VYS4 303 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 LSMEM2Q8N112 164 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 Q8N402 240 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 FUBP3Q96I24 572 aaKnown RBP eCLIP16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 CAMK1GQ96NX5 476 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 TMLHEQ9NVH6 421 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 ERVW-1Q9UQF0 538 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 A0A1W2PQ67 120 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 SLC19A2O60779 497 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 RAB36O95755 333 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 ECDO95905 644 aaPredicted RBP16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 ALPLP05186 524 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 BCKDHAP12694 445 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 ZNF10P21506 573 aaPredicted RBP16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 HTR1BP28222 390 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 TLX1P31314 330 aaPredicted RBP16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 ZNF81P51508 661 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 CASP9P55211 416 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 RANBP10Q6VN20 620 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 GALNT13Q8IUC8 556 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 KRTCAP2Q8N6L1 136 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 GDPD1Q8N9F7 314 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 PYCR2Q96C36 320 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 ABCB8Q9NUT2 735 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 KIAA1522Q9P206 1035 aaPredicted RBP16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 TJP1Q07157 1748 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 ANKRD66B4E2M5 251 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 ANXA3P12429 323 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 FUT4P22083 530 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 CA5AP35218 305 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 SSR2P43308 183 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 CLK3P49761 638 aaKnown RBP16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 WDR45BQ5MNZ6 344 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 C9orf64Q5T6V5 341 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 SLC24A5Q71RS6 500 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 ASF1AQ9Y294 204 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 SLC45A1Q9Y2W3 748 aa16.68■□□□□ 0.26
HMGXB3-201ENST00000502717 OR7A10O76100 309 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 SERPINA3P01011 423 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 MAGEA2P43356 314 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 PRKCZQ05513 592 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 ZNF691Q5VV52 312 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 DENND6BQ8NEG7 585 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 NFKBIDQ8NI38 313 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 SPATA9Q9BWV2 254 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 PIGUQ9H490 435 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 RGS17Q9UGC6 210 aaPredicted RBP16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 PCTPQ9UKL6 214 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 PADI3Q9ULW8 664 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 GPR45Q9Y5Y3 372 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 HMX3A6NHT5 357 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 CLDN24A6NM45 220 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 RIIAD1A6NNX1 92 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 M0R233 179 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 TPST2O60704 377 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 HMGN1P05114 100 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 ITGAMP11215 1152 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 RPL6Q02878 288 aaKnown RBP16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 OAFQ86UD1 273 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 SNX29P2Q8IUI4 249 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 CNTN4Q8IWV2 1026 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 SLC43A3Q8NBI5 491 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 ZBTB20Q9HC78 741 aaPredicted RBP16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 PRKAB1Q9Y478 270 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 PLCH1Q4KWH8 1693 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 DAPL1A0PJW8 107 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 L7N2F9 121 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 SHMT2P34897 504 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 ACVRL1P37023 503 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 MNDAP41218 407 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 DUSP4Q13115 394 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 CRHR2Q13324 411 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 TNFAIP8L2Q6P589 184 aaPredicted RBP16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 PAMR1Q6UXH9 720 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 C1orf52Q8N6N3 182 aaKnown RBP16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 RAD51AP1Q96B01 352 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 EXOSC8Q96B26 276 aaKnown RBP16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 FAM129BQ96TA1 746 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 FOLH1BQ9HBA9 442 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 ENAMQ9NRM1 1142 aa16.67■□□□□ 0.26
HMGXB3-201ENST00000502717 CD300AQ9UGN4 299 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms