RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 PTPN6P29350 595 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 CD40LGP29965 261 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 TGFBR2P37173 567 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 HPCAL1P37235 193 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 MAPKAPK2P49137 400 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 CLCNKBP51801 687 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 PLK1P53350 603 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 C21orf58P58505 322 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 ERVPABLB-1P60509 514 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 SLC35A2P78381 396 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 CHRNEQ04844 493 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 SLC10A7Q0GE19 358 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 TAF1AQ15573 450 aaPredicted RBP3.8□□□□□ -1.8
CLTC-209ENST00000498711 KIF19Q2TAC6 998 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 FAM98BQ52LJ0 330 aaKnown RBP3.8□□□□□ -1.8
CLTC-209ENST00000498711 MS4A13Q5J8X5 152 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 CTSL3PQ5NE16 218 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 ZNF362Q5T0B9 420 aaPredicted RBP3.8□□□□□ -1.8
CLTC-209ENST00000498711 MARC1Q5VT66 337 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 UBE2UQ5VVX9 321 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 LAIR1Q6GTX8 287 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 MRNIPQ6NTE8 343 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 SHQ1Q6PI26 577 aaKnown RBP3.8□□□□□ -1.8
CLTC-209ENST00000498711 MSANTD1Q6ZTZ1 278 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 TMEM179BQ7Z7N9 219 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 RBM23Q86U06 439 aaKnown RBP3.8□□□□□ -1.8
CLTC-209ENST00000498711 OFCC1Q8IZS5 231 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 ELMOD1Q8N336 334 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 FBXO39Q8N4B4 442 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 OR4L1Q8NH43 312 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 RHOXF1Q8NHV9 184 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 DNAJB3Q8WWF6 145 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 GTF2H4Q92759 462 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 TP53INP1Q96A56 240 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 HMCESQ96FZ2 354 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 TMEM41AQ96HV5 264 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 PAWRQ96IZ0 340 aaKnown RBP3.8□□□□□ -1.8
CLTC-209ENST00000498711 SERPINB11Q96P15 392 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 RAD9AQ99638 391 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 MGME1Q9BQP7 344 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 ZYG11BQ9C0D3 744 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 ATP13A3Q9H7F0 1226 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 RMND5AQ9H871 391 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 NMUR1Q9HB89 426 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 PLCXD1Q9NUJ7 323 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 NUDT4Q9NZJ9 180 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.8□□□□□ -1.8
CLTC-209ENST00000498711 FBXO10Q9UK96 956 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 WASF3Q9UPY6 502 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 PIN4Q9Y237 131 aaKnown RBP3.8□□□□□ -1.8
CLTC-209ENST00000498711 BTRCQ9Y297 605 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 PCDHB1Q9Y5F3 818 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 PCDHGB2Q9Y5G2 931 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 ZNF106Q9H2Y7 1883 aaKnown RBP3.8□□□□□ -1.8
CLTC-209ENST00000498711 LOC100130705A0A1B0GUX0 176 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 TRIM43BA6NCK2 446 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 G3V2T6 193 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 TMEM189-UBE2V1I3L0A0 370 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 TAF4O00268 1085 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 SLC1A7O00341 560 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 MUSKO15146 869 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 SNX2O60749 519 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 FGF18O76093 207 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 SNX4O95219 450 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 THP07101 528 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 ZDHHC11BP0C7U3 371 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 HAPLN1P10915 354 aaPredicted RBP3.8□□□□□ -1.8
CLTC-209ENST00000498711 TSPAN8P19075 237 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 EN2P19622 333 aaPredicted RBP3.8□□□□□ -1.8
CLTC-209ENST00000498711 XPAP23025 273 aaPredicted RBP3.8□□□□□ -1.8
CLTC-209ENST00000498711 RPS3P23396 243 aaKnown RBP eCLIP3.8□□□□□ -1.82e-11■■□□□ 13.8
CLTC-209ENST00000498711 PRDX3P30048 256 aaKnown RBP3.8□□□□□ -1.8
CLTC-209ENST00000498711 DCTP40126 519 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 CD86P42081 329 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 MAGEA11P43364 429 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 YAP1P46937 504 aaKnown RBP3.8□□□□□ -1.8
CLTC-209ENST00000498711 RXRGP48443 463 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 CCR3P51677 355 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 CSNK2BP67870 215 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 EMX1Q04741 257 aaPredicted RBP3.8□□□□□ -1.8
CLTC-209ENST00000498711 RAD51Q06609 339 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 PRKG2Q13237 762 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 STARD3Q14849 445 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 PLCL1Q15111 1095 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 CYP2A13Q16696 494 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 PHKG1Q16816 387 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 PFKFB4Q16877 469 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 GEN1Q17RS7 908 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 ADPRMQ3LIE5 342 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 TTLL9Q3SXZ7 439 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 CDKL4Q5MAI5 379 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 SLX4IPQ5VYV7 408 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 KDM4DQ6B0I6 523 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 PGBD2Q6P3X8 592 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 SLC2A7Q6PXP3 512 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 C19orf48Q6RUI8 117 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 PAQR3Q6TCH7 311 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 PIWIL3Q7Z3Z3 882 aaKnown RBP3.8□□□□□ -1.8
CLTC-209ENST00000498711 HIPK1Q86Z02 1210 aa3.8□□□□□ -1.8
CLTC-209ENST00000498711 LIX1LQ8IVB5 337 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms