RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 TRRAPQ9Y4A5 3859 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 C17orf113A0A1B0GUU1 675 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 KRT87PA6NCN2 255 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 NKX2-6A6NCS4 301 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 AGAP14A8MT82 685 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 FAM171A2A8MVW0 826 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 FOXO6A8MYZ6 492 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 APOC4-APOC2K7ER74 178 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 AGPSO00116 658 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 FFAR3O14843 346 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 GPR42O15529 346 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 PSTPIP1O43586 416 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 MFAP3LO75121 409 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 HTR3BO95264 441 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 APOC2P02655 101 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 TPM3P06753 285 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 TPM1P09493 284 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 RBP3P10745 1247 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 PYGMP11217 842 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 VAMP1P23763 118 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 PEBP1P30086 187 aaKnown RBP5.26□□□□□ -1.57
SPTA1-209ENST00000498708 SHMT2P34897 504 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 ADRA1AP35348 466 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 HADHAP40939 763 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 OR1D4P47884 311 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 ZNF140P52738 457 aaPredicted RBP5.26□□□□□ -1.57
SPTA1-209ENST00000498708 NAP1L1P55209 391 aaKnown RBP5.26□□□□□ -1.57
SPTA1-209ENST00000498708 CASP6P55212 293 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 PPP2R2BQ00005 443 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 MSLNQ13421 630 aaPredicted RBP5.26□□□□□ -1.57
SPTA1-209ENST00000498708 RBBP7Q16576 425 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 TAZQ16635 292 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 NKAIN1Q4KMZ8 207 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 CCDC38Q502W7 563 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 IRAK1BP1Q5VVH5 260 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 DENND5AQ6IQ26 1287 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 HMBOX1Q6NT76 420 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 C3P1Q6ZMU1 363 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 ARHGEF18Q6ZSZ5 1173 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 BBS12Q6ZW61 710 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 VSIG1Q86XK7 387 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 RELL1Q8IUW5 271 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 CDKL3Q8IVW4 592 aaPredicted RBP5.26□□□□□ -1.57
SPTA1-209ENST00000498708 PIANPQ8IYJ0 282 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 KATNAL2Q8IYT4 538 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 RCOR2Q8IZ40 523 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 DNAJC22Q8N4W6 341 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 FLVCR1-AS1Q8TAF5 88 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 ACTL9Q8TC94 416 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 PROKR1Q8TCW9 393 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 C8orf44Q96CB5 159 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 MBD6Q96DN6 1003 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 CDKN2AIPNLQ96HQ2 116 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 IP6K3Q96PC2 410 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 ALS2CR12Q96Q35 445 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 DNAJC7Q99615 494 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 C17orf62Q9BQA9 187 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 AP1M1Q9BXS5 423 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 POLDIP3Q9BY77 421 aaKnown RBP5.26□□□□□ -1.57
SPTA1-209ENST00000498708 VPS37BQ9H9H4 285 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 ZNF160Q9HCG1 818 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 EURLQ9NYK6 297 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 PLA2G3Q9NZ20 509 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 KCNN3Q9UGI6 736 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 PLCL2Q9UPR0 1127 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 ZNF835Q9Y2P0 537 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 AAR2Q9Y312 384 aaKnown RBP5.26□□□□□ -1.57
SPTA1-209ENST00000498708 AP1M2Q9Y6Q5 423 aa5.26□□□□□ -1.57
SPTA1-209ENST00000498708 A0A0J9YVX5 310 aa5.25□□□□□ -1.57
SPTA1-209ENST00000498708 IQCF5A8MTL0 148 aa5.25□□□□□ -1.57
SPTA1-209ENST00000498708 H3BMH7 237 aa5.25□□□□□ -1.57
SPTA1-209ENST00000498708 SOCS6O14544 535 aa5.25□□□□□ -1.57
SPTA1-209ENST00000498708 ADAM10O14672 748 aa5.25□□□□□ -1.57
SPTA1-209ENST00000498708 LIN7AO14910 233 aaPredicted RBP5.25□□□□□ -1.57
SPTA1-209ENST00000498708 SMAD7O15105 426 aaKnown RBP5.25□□□□□ -1.57
SPTA1-209ENST00000498708 CBFA2T2O43439 604 aa5.25□□□□□ -1.57
SPTA1-209ENST00000498708 OR1I1O60431 355 aa5.25□□□□□ -1.57
SPTA1-209ENST00000498708 STK10O94804 968 aaKnown RBP5.25□□□□□ -1.57
SPTA1-209ENST00000498708 IPO7O95373 1038 aaKnown RBP5.25□□□□□ -1.57
SPTA1-209ENST00000498708 METTL18O95568 372 aa5.25□□□□□ -1.57
SPTA1-209ENST00000498708 IGHEP01854 428 aa5.25□□□□□ -1.57
SPTA1-209ENST00000498708 PF4P02776 101 aa5.25□□□□□ -1.57
SPTA1-209ENST00000498708 EIF2S1P05198 315 aaKnown RBP5.25□□□□□ -1.57
SPTA1-209ENST00000498708 HOXD4P09016 255 aaPredicted RBP5.25□□□□□ -1.57
SPTA1-209ENST00000498708 ITGAXP20702 1163 aa5.25□□□□□ -1.57
SPTA1-209ENST00000498708 MSNP26038 577 aaKnown RBP5.25□□□□□ -1.57
SPTA1-209ENST00000498708 VSX2P58304 361 aaPredicted RBP5.25□□□□□ -1.57
SPTA1-209ENST00000498708 PMP22Q01453 160 aa5.25□□□□□ -1.57
SPTA1-209ENST00000498708 EEF1A2Q05639 463 aaKnown RBP5.25□□□□□ -1.57
SPTA1-209ENST00000498708 RBPJQ06330 500 aa5.25□□□□□ -1.57
SPTA1-209ENST00000498708 CACNG1Q06432 222 aa5.25□□□□□ -1.57
SPTA1-209ENST00000498708 RUNX1T1Q06455 604 aa5.25□□□□□ -1.57
SPTA1-209ENST00000498708 HSPA14Q0VDF9 509 aa5.25□□□□□ -1.57
SPTA1-209ENST00000498708 AIMP2Q13155 320 aaKnown RBP5.25□□□□□ -1.57
SPTA1-209ENST00000498708 RPA4Q13156 261 aa5.25□□□□□ -1.57
SPTA1-209ENST00000498708 MYBPHQ13203 477 aa5.25□□□□□ -1.57
SPTA1-209ENST00000498708 TRIM14Q14142 442 aa5.25□□□□□ -1.57
SPTA1-209ENST00000498708 SF1Q15637 639 aaKnown RBP5.25□□□□□ -1.57
SPTA1-209ENST00000498708 DEFB113Q30KQ7 82 aa5.25□□□□□ -1.57
SPTA1-209ENST00000498708 TUBB8Q3ZCM7 444 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms