RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 BMPERQ8N8U9 685 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 ANKRD53Q8N9V6 530 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 CREB3L4Q8TEY5 395 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 ZNF501Q96CX3 271 aaPredicted RBP18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 CMTM7Q96FZ5 175 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 CDK15Q96Q40 435 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 TEFMQ96QE5 360 aaKnown RBP18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 FGF21Q9NSA1 209 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 DNAJC15Q9Y5T4 150 aa18.87■□□□□ 0.61
SCAMP3-209ENST00000497470 CSO75390 466 aaKnown RBP18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 CRCPO75575 148 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 STXBP1P61764 594 aaKnown RBP18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 RGS1Q08116 209 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 FAM53BQ14153 422 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 RBBP5Q15291 538 aaKnown RBP18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 SMU1Q2TAY7 513 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 FAM214AQ32MH5 1076 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 TTC19Q6DKK2 380 aaPredicted RBP18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 CHSY3Q70JA7 882 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 VN1R4Q7Z5H5 301 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 B3GNT8Q7Z7M8 397 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 MYLK4Q86YV6 388 aaPredicted RBP18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 ZNF781Q8N8C0 355 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 ZNF740Q8NDX6 193 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 HUS1BQ8NHY5 278 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 WDR36Q8NI36 951 aaKnown RBP18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 SLC13A3Q8WWT9 602 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 SELENOMQ8WWX9 145 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 MVB12AQ96EY5 273 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 ZNF317Q96PQ6 595 aaPredicted RBP18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 SERPINI1Q99574 410 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 SLC6A16Q9GZN6 736 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 SPNS1Q9H2V7 528 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 SYNDIG1Q9H7V2 258 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 SIRT5Q9NXA8 310 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 KLHL3Q9UH77 587 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 PCDHGA8Q9Y5G5 932 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 PCDHGA3Q9Y5H0 932 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 SLC22A7Q9Y694 548 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 KNTC1P50748 2209 aa18.86■□□□□ 0.61
SCAMP3-209ENST00000497470 TRPC5OSA6NMA1 111 aa18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 H0YGG7 62 aa18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 SLC28A1O00337 649 aa18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 HDAC3O15379 428 aa18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 VPS4BO75351 444 aa18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 HBQ1P09105 142 aa18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 ALOX15P16050 662 aaPredicted RBP18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 CCR10P46092 362 aa18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 GCGRP47871 477 aa18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 ARSFP54793 590 aa18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 ITGA1P56199 1179 aa18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 ARF3P61204 181 aaPredicted RBP18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 GRM7Q14831 915 aa18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 C16orf72Q14CZ0 275 aa18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 SNAP47Q5SQN1 464 aa18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 ALYREFQ86V81 257 aaKnown RBP18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 PARP9Q8IXQ6 854 aa18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.85■□□□□ 0.615e-6■■■■■ 81.8
SCAMP3-209ENST00000497470 CENPKQ9BS16 269 aa18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 DDA1Q9BW61 102 aa18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 MS4A8Q9BY19 250 aa18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 DMRT3Q9NQL9 472 aa18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 SRPK3Q9UPE1 567 aa18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 KLHL20Q9Y2M5 609 aa18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 PCDHB3Q9Y5E6 796 aa18.85■□□□□ 0.61
SCAMP3-209ENST00000497470 CNOT1A5YKK6 2376 aaKnown RBP18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 A0A0J9YVX5 310 aa18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 FEZF1A0PJY2 475 aa18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 A8MU76 341 aa18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 TCP11X1B4DZS4 312 aa18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 CASC3O15234 703 aaKnown RBP18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 LYPLA1O75608 230 aaPredicted RBP18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 ACPPP15309 386 aa18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 FOLR1P15328 257 aa18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 MPSTP25325 297 aa18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 SEPHS1P49903 392 aa18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 SKP1P63208 163 aa18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 TGM3Q08188 693 aa18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 NDUFA9Q16795 377 aa18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 DEPDC1Q5TB30 811 aa18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 VN1R5Q7Z5H4 357 aa18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 GPR135Q8IZ08 494 aa18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 ARHGEF39Q8N4T4 335 aa18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 N4BP2L2Q92802 583 aaPredicted RBP18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 ASPSCR1Q9BZE9 553 aa18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 FAM117AQ9C073 453 aa18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 ROGDIQ9GZN7 287 aa18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 TNFRSF12AQ9NP84 129 aa18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 ACSS2Q9NR19 701 aa18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 RARRES3Q9UL19 164 aa18.84■□□□□ 0.61
SCAMP3-209ENST00000497470 WDR87Q6ZQQ6 2873 aa18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 LRIT2A6NDA9 550 aa18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 RSL1D1O76021 490 aaKnown RBP18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 SMIM10L1P0DMW3 83 aa18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 FOXA1P55317 472 aa18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 IRX1P78414 480 aaPredicted RBP18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 MEF2AQ02078 507 aaPredicted RBP18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 TUBB3Q13509 450 aa18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 XKR7Q5GH72 579 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms