RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 RDH16O75452 317 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 SERPINA7P05543 415 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 HIST1H2AGP0C0S8 130 aaPredicted RBP13.5□□□□□ -0.25
VTI1A-209ENST00000496445 ITGAMP11215 1152 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 ZNF37AP17032 561 aaPredicted RBP13.5□□□□□ -0.25
VTI1A-209ENST00000496445 HIST1H2ADP20671 130 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 CXCR2P25025 360 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 RPL21P46778 160 aaKnown RBP13.5□□□□□ -0.25
VTI1A-209ENST00000496445 AP1S2P56377 157 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 PDIA2Q13087 525 aaKnown RBP13.5□□□□□ -0.25
VTI1A-209ENST00000496445 ZNF460Q14592 562 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 B3GNTL1Q67FW5 361 aaPredicted RBP13.5□□□□□ -0.25
VTI1A-209ENST00000496445 DUPD1Q68J44 220 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 LANCL3Q6ZV70 420 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 MFSD9Q8NBP5 474 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 CAMKVQ8NCB2 501 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 FBXO36Q8NEA4 188 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 CATSPER1Q8NEC5 780 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 ABHD11Q8NFV4 315 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 FBXL8Q96CD0 374 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 HIST1H2AHQ96KK5 128 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 IMMP1LQ96LU5 166 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 LMF1Q96S06 567 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 HIST1H2AJQ99878 128 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 MCMBPQ9BTE3 642 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 H2AFJQ9BTM1 129 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 SARGQ9BW04 601 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 LRRC4CQ9HCJ2 640 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 ZFATQ9P243 1243 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 PTGFRNQ9P2B2 879 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 ERRFI1Q9UJM3 462 aaPredicted RBP13.5□□□□□ -0.25
VTI1A-209ENST00000496445 CELSR2Q9HCU4 2923 aa13.5□□□□□ -0.25
VTI1A-209ENST00000496445 IGHV3-20A0A0C4DH32 117 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 OR2W5A6NFC9 320 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 EFCAB8A8MWE9 144 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 GUCA1CO95843 209 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 ENO2P09104 434 aaPredicted RBP13.49□□□□□ -0.25
VTI1A-209ENST00000496445 C8orf89P0DMQ9 161 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 XCR1P46094 333 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 CCR8P51685 355 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 MRPS25P82663 173 aaKnown RBP13.49□□□□□ -0.25
VTI1A-209ENST00000496445 MGAT5Q09328 741 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 CDC16Q13042 620 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 TLR1Q15399 786 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 CATSPEREQ5SY80 951 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 RIPOR1Q6ZS17 1223 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 ZC3HC1Q86WB0 502 aaKnown RBP13.49□□□□□ -0.25
VTI1A-209ENST00000496445 AFAP1L2Q8N4X5 818 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 ST6GALNAC3Q8NDV1 305 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 ZNF740Q8NDX6 193 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 OR4K1Q8NGD4 311 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 OR51Q1Q8NH59 317 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 GRHL3Q8TE85 626 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 SLC13A3Q8WWT9 602 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 MOCOSQ96EN8 888 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 PDLIM5Q96HC4 596 aaKnown RBP13.49□□□□□ -0.25
VTI1A-209ENST00000496445 KRT12Q99456 494 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 HAUS8Q9BT25 410 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 PLA2G3Q9NZ20 509 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 MOCS1Q9NZB8 636 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 PLEKHB1Q9UF11 243 aaPredicted RBP13.49□□□□□ -0.25
VTI1A-209ENST00000496445 SNX24Q9Y343 169 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 SVILO95425 2214 aa13.49□□□□□ -0.25
VTI1A-209ENST00000496445 ZGRF1Q86YA3 2104 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 CROCCQ5TZA2 2017 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 FAM95CA0A1B0GW59 222 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 CTAGE15A4D2H0 777 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 NPEPPSL1A6NEC2 478 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 ZNF860A6NHJ4 632 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 CDC7O00311 574 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 NDUFS4O43181 175 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 LDLRP01130 860 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 SLC35G6P0C7Q6 338 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 SAT1P21673 171 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 GRK3P35626 688 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 TNFSF10P50591 281 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 ARG2P78540 354 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 CBLBQ13191 982 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 MINDY4Q4G0A6 757 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 MFSD4BQ5TF39 518 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 STRA8Q7Z7C7 330 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 CTAGE6Q86UF2 777 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 OR5T3Q8NGG3 340 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 ANKRD49Q8WVL7 239 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 SLC5A11Q8WWX8 675 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 NEIL2Q969S2 332 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 TSNARE1Q96NA8 513 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 TUBB6Q9BUF5 446 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 RBCK1Q9BYM8 510 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 ANKHQ9HCJ1 492 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 SMYD2Q9NRG4 433 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 AGPAT4Q9NRZ5 378 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 NAALAD2Q9Y3Q0 740 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 SLC22A7Q9Y694 548 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 ITPR2Q14571 2701 aa13.48□□□□□ -0.25
VTI1A-209ENST00000496445 TRBC2A0A5B9 178 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 A1L4Q6 167 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 WIPF3A6NGB9 483 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 OR1F1O43749 312 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 DNAJB6O75190 326 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms