RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 PRR35P0CG20 571 aa22.93■■□□□ 1.26
HLA-C-209ENST00000495835 SAT1P21673 171 aa22.93■■□□□ 1.26
HLA-C-209ENST00000495835 GNLYP22749 145 aa22.93■■□□□ 1.26
HLA-C-209ENST00000495835 AHRP35869 848 aa22.93■■□□□ 1.26
HLA-C-209ENST00000495835 PGGT1BP53609 377 aa22.93■■□□□ 1.26
HLA-C-209ENST00000495835 SRSF1Q07955 248 aaKnown RBP eCLIP22.93■■□□□ 1.26
HLA-C-209ENST00000495835 MFAP5Q13361 173 aa22.93■■□□□ 1.26
HLA-C-209ENST00000495835 SYT16Q17RD7 645 aa22.93■■□□□ 1.26
HLA-C-209ENST00000495835 B3GNTL1Q67FW5 361 aaPredicted RBP22.93■■□□□ 1.26
HLA-C-209ENST00000495835 ZNF572Q7Z3I7 529 aaPredicted RBP22.93■■□□□ 1.26
HLA-C-209ENST00000495835 OR51Q1Q8NH59 317 aa22.93■■□□□ 1.26
HLA-C-209ENST00000495835 DNAJB14Q8TBM8 379 aa22.93■■□□□ 1.26
HLA-C-209ENST00000495835 BARD1Q99728 777 aaKnown RBP22.93■■□□□ 1.26
HLA-C-209ENST00000495835 CPNE1Q99829 537 aa22.93■■□□□ 1.26
HLA-C-209ENST00000495835 TUBB6Q9BUF5 446 aa22.93■■□□□ 1.26
HLA-C-209ENST00000495835 CLK4Q9HAZ1 481 aaKnown RBP22.93■■□□□ 1.26
HLA-C-209ENST00000495835 SAYSD1Q9NPB0 183 aa22.93■■□□□ 1.26
HLA-C-209ENST00000495835 GRHL1Q9NZI5 618 aa22.93■■□□□ 1.26
HLA-C-209ENST00000495835 CTNNAL1Q9UBT7 734 aa22.93■■□□□ 1.26
HLA-C-209ENST00000495835 C19orf25Q9UFG5 118 aaPredicted RBP22.93■■□□□ 1.26
HLA-C-209ENST00000495835 ZFP69BQ9UJL9 534 aa22.93■■□□□ 1.26
HLA-C-209ENST00000495835 DYRK1BQ9Y463 629 aa22.93■■□□□ 1.26
HLA-C-209ENST00000495835 PCDHGA10Q9Y5H3 936 aa22.93■■□□□ 1.26
HLA-C-209ENST00000495835 KCNE2Q9Y6J6 123 aa22.93■■□□□ 1.26
HLA-C-209ENST00000495835 ESPL1Q14674 2120 aa22.93■■□□□ 1.26
HLA-C-209ENST00000495835 CNTRLQ7Z7A1 2325 aa22.92■■□□□ 1.26
HLA-C-209ENST00000495835 DOPEY2Q9Y3R5 2298 aa22.92■■□□□ 1.26
HLA-C-209ENST00000495835 OR1F1O43749 312 aa22.92■■□□□ 1.26
HLA-C-209ENST00000495835 C8orf89P0DMQ9 161 aa22.92■■□□□ 1.26
HLA-C-209ENST00000495835 SSTR1P30872 391 aa22.92■■□□□ 1.26
HLA-C-209ENST00000495835 MAT1AQ00266 395 aaKnown RBP22.92■■□□□ 1.26
HLA-C-209ENST00000495835 FHL5Q5TD97 284 aa22.92■■□□□ 1.26
HLA-C-209ENST00000495835 CUZD1Q86UP6 607 aa22.92■■□□□ 1.26
HLA-C-209ENST00000495835 THOC6Q86W42 341 aaKnown RBP22.92■■□□□ 1.26
HLA-C-209ENST00000495835 KLHDC8AQ8IYD2 350 aa22.92■■□□□ 1.26
HLA-C-209ENST00000495835 AFAP1L2Q8N4X5 818 aa22.92■■□□□ 1.26
HLA-C-209ENST00000495835 KCT2Q8NC54 265 aa22.92■■□□□ 1.26
HLA-C-209ENST00000495835 NEIL2Q969S2 332 aa22.92■■□□□ 1.26
HLA-C-209ENST00000495835 CYTH2Q99418 400 aa22.92■■□□□ 1.26
HLA-C-209ENST00000495835 DERL2Q9GZP9 239 aa22.92■■□□□ 1.26
HLA-C-209ENST00000495835 SMYD2Q9NRG4 433 aa22.92■■□□□ 1.26
HLA-C-209ENST00000495835 IKZF3Q9UKT9 509 aa22.92■■□□□ 1.26
HLA-C-209ENST00000495835 COPG1Q9Y678 874 aaKnown RBP22.92■■□□□ 1.26
HLA-C-209ENST00000495835 URADA6NGE7 173 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 TCP11X1B4DZS4 312 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 CDC7O00311 574 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 FFAR3O14843 346 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 GPR42O15529 346 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 IL1RNP18510 177 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 TSFMP43897 325 aaKnown RBP22.91■■□□□ 1.26
HLA-C-209ENST00000495835 SCTRP47872 440 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 AGTR2P50052 363 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 C2orf54Q08AI8 447 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 TLR1Q15399 786 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 PRR30Q53SZ7 412 aaPredicted RBP22.91■■□□□ 1.26
HLA-C-209ENST00000495835 CDKL4Q5MAI5 379 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 SYT10Q6XYQ8 523 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 C3orf62Q6ZUJ4 267 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 CEP97Q8IW35 865 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 CISD2Q8N5K1 135 aaKnown RBP22.91■■□□□ 1.26
HLA-C-209ENST00000495835 TRPV3Q8NET8 790 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 NT5CQ8TCD5 201 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 PSMF1Q92530 271 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 OR1F2PQ96R84 312 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 MACROD1Q9BQ69 325 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 AIF1LQ9BQI0 150 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 MESP1Q9BRJ9 268 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 VN1R1Q9GZP7 353 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 AGPAT4Q9NRZ5 378 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 SCN3AQ9NY46 2000 aa22.91■■□□□ 1.26
HLA-C-209ENST00000495835 USP9XQ93008 2570 aaPredicted RBP22.91■■□□□ 1.26
HLA-C-209ENST00000495835 TCRBV9S1A1TA0A576 114 aa22.9■■□□□ 1.26
HLA-C-209ENST00000495835 FAM159BA6NKW6 160 aa22.9■■□□□ 1.26
HLA-C-209ENST00000495835 WISP3O95389 354 aaPredicted RBP22.9■■□□□ 1.26
HLA-C-209ENST00000495835 SOX11P35716 441 aa22.9■■□□□ 1.26
HLA-C-209ENST00000495835 XCR1P46094 333 aa22.9■■□□□ 1.26
HLA-C-209ENST00000495835 UQCRFS1P47985 274 aa22.9■■□□□ 1.26
HLA-C-209ENST00000495835 GLRBP48167 497 aa22.9■■□□□ 1.26
HLA-C-209ENST00000495835 MRPS25P82663 173 aaKnown RBP22.9■■□□□ 1.26
HLA-C-209ENST00000495835 EEF1A2Q05639 463 aaKnown RBP22.9■■□□□ 1.26
HLA-C-209ENST00000495835 RGS1Q08116 209 aa22.9■■□□□ 1.26
HLA-C-209ENST00000495835 PCOLCEQ15113 449 aa22.9■■□□□ 1.26
HLA-C-209ENST00000495835 CATSPEREQ5SY80 951 aa22.9■■□□□ 1.26
HLA-C-209ENST00000495835 RPUSD3Q6P087 351 aaKnown RBP22.9■■□□□ 1.26
HLA-C-209ENST00000495835 NXPE4Q6UWF7 544 aa22.9■■□□□ 1.26
HLA-C-209ENST00000495835 FRA10AC1Q70Z53 315 aa22.9■■□□□ 1.26
HLA-C-209ENST00000495835 PRSS41Q7RTY9 318 aa22.9■■□□□ 1.26
HLA-C-209ENST00000495835 ANKRD49Q8WVL7 239 aa22.9■■□□□ 1.26
HLA-C-209ENST00000495835 IMMP1LQ96LU5 166 aa22.9■■□□□ 1.26
HLA-C-209ENST00000495835 EGFL8Q99944 293 aa22.9■■□□□ 1.26
HLA-C-209ENST00000495835 CAPS2Q9BXY5 557 aa22.9■■□□□ 1.26
HLA-C-209ENST00000495835 ASF1BQ9NVP2 202 aa22.9■■□□□ 1.26
HLA-C-209ENST00000495835 MAP10Q9P2G4 905 aa22.9■■□□□ 1.26
HLA-C-209ENST00000495835 SLC22A14Q9Y267 594 aa22.9■■□□□ 1.26
HLA-C-209ENST00000495835 NAALAD2Q9Y3Q0 740 aa22.9■■□□□ 1.26
HLA-C-209ENST00000495835 NPEPPSL1A6NEC2 478 aa22.89■■□□□ 1.25
HLA-C-209ENST00000495835 SGK494L7N484 410 aa22.89■■□□□ 1.25
HLA-C-209ENST00000495835 NDUFS4O43181 175 aa22.89■■□□□ 1.25
HLA-C-209ENST00000495835 WFS1O76024 890 aa22.89■■□□□ 1.25
HLA-C-209ENST00000495835 KLHL18O94889 574 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms