RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 A0A1B0GVT2 93 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 A0A1W2PP55 124 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 E7EQ34 232 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 PRAMEF4O60810 478 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 IGHV4-34P06331 123 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 PGRP06401 933 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 C1GALT1C1LP0DN25 315 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 TCN1P20061 433 aaPredicted RBP15.66■□□□□ 0.1
CBX4-204ENST00000495122 PIK3CBP42338 1070 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 GSK3BP49841 420 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 AFF3P51826 1226 aaKnown RBP15.66■□□□□ 0.1
CBX4-204ENST00000495122 LIPEQ05469 1076 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 IRF4Q15306 451 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 LRIF1Q5T3J3 769 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 PRAMEF9Q5VWM5 478 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 CRTC3Q6UUV7 619 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 HORMAD1Q86X24 394 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 PDSS2Q86YH6 399 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 LRRC56Q8IYG6 542 aaPredicted RBP15.66■□□□□ 0.1
CBX4-204ENST00000495122 TBC1D21Q8IYX1 336 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 LILRA3Q8N6C8 439 aaPredicted RBP15.66■□□□□ 0.1
CBX4-204ENST00000495122 OR52E4Q8NGH9 312 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 OR5K2Q8NHB8 316 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 CXorf40BQ96DE9 158 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 ITCHQ96J02 903 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 CCDC115Q96NT0 180 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 OR4K3Q96R72 315 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 NR1H4Q96RI1 486 aaPredicted RBP15.66■□□□□ 0.1
CBX4-204ENST00000495122 RAB11FIP5Q9BXF6 653 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 TM9SF3Q9HD45 589 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 FAM8A1Q9UBU6 413 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 PACSIN3Q9UKS6 424 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 PCDHB3Q9Y5E6 796 aa15.66■□□□□ 0.1
CBX4-204ENST00000495122 ADAMTS20P59510 1910 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 A0A096LPI6 279 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 C10orf142B7Z368 130 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 HNRNPRO43390 633 aaKnown RBP15.65■□□□□ 0.1
CBX4-204ENST00000495122 KDM1AO60341 852 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 CBFA2T3O75081 653 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 SLC35G4P0C7Q5 338 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 SDC1P18827 310 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 IL10P22301 178 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 CXCR2P25025 360 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 PSMA4P25789 261 aaKnown RBP15.65■□□□□ 0.1
CBX4-204ENST00000495122 CD27P26842 260 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 S100A3P33764 101 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 RPL3P39023 403 aaKnown RBP15.65■□□□□ 0.1
CBX4-204ENST00000495122 TRPC1P48995 793 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 CSNK1EP49674 416 aaKnown RBP15.65■□□□□ 0.1
CBX4-204ENST00000495122 TAP2Q03519 686 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 ACSM2AQ08AH3 577 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 CAPRIN1Q14444 709 aaKnown RBP15.65■□□□□ 0.1
CBX4-204ENST00000495122 NFE2L1Q14494 772 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 PTGR1Q14914 329 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 TRIP6Q15654 476 aaKnown RBP15.65■□□□□ 0.1
CBX4-204ENST00000495122 CYP2A13Q16696 494 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 HLA-BQ31612 363 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 FAM174BQ3ZCQ3 159 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 ACSM2BQ68CK6 577 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 KIAA0895LQ68EN5 471 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 NOXRED1Q6NXP6 359 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 GALNT18Q6P9A2 607 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 SLC2A7Q6PXP3 512 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 SUSD1Q6UWL2 747 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 RNF111Q6ZNA4 994 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 FKBP9P1Q75LS8 142 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 RIMKLAQ8IXN7 391 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 SLC5A11Q8WWX8 675 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 TFGQ92734 400 aaPredicted RBP15.65■□□□□ 0.1
CBX4-204ENST00000495122 GTF2H4Q92759 462 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 C11orf24Q96F05 449 aaPredicted RBP15.65■□□□□ 0.1
CBX4-204ENST00000495122 SLC45A3Q96JT2 553 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 SLC39A3Q9BRY0 314 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 SLC17A9Q9BYT1 436 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 TRIT1Q9H3H1 467 aaKnown RBP15.65■□□□□ 0.1
CBX4-204ENST00000495122 Q9H521 79 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 PELI2Q9HAT8 420 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 IL1RL2Q9HB29 575 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 TM7SF3Q9NS93 570 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 CCM2LQ9NUG4 571 aaPredicted RBP15.65■□□□□ 0.1
CBX4-204ENST00000495122 KLK13Q9UKR3 277 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 PCOLCE2Q9UKZ9 415 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 ZFR2Q9UPR6 939 aaKnown RBP15.65■□□□□ 0.1
CBX4-204ENST00000495122 ASF1AQ9Y294 204 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 SLC17A4Q9Y2C5 497 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 DTNAQ9Y4J8 743 aa15.65■□□□□ 0.1
CBX4-204ENST00000495122 GOLGA4Q13439 2230 aaKnown RBP15.64■□□□□ 0.09
CBX4-204ENST00000495122 TOR1BO14657 336 aa15.64■□□□□ 0.09
CBX4-204ENST00000495122 ARPC2O15144 300 aa15.64■□□□□ 0.09
CBX4-204ENST00000495122 RNGTTO60942 597 aaKnown RBP15.64■□□□□ 0.09
CBX4-204ENST00000495122 GMNNO75496 209 aa15.64■□□□□ 0.09
CBX4-204ENST00000495122 NPPBP16860 134 aa15.64■□□□□ 0.09
CBX4-204ENST00000495122 CD22P20273 847 aa15.64■□□□□ 0.09
CBX4-204ENST00000495122 GTF2A1P52655 376 aaPredicted RBP15.64■□□□□ 0.09
CBX4-204ENST00000495122 ADPRHP54922 357 aa15.64■□□□□ 0.09
CBX4-204ENST00000495122 KIAA1024LP59773 190 aa15.64■□□□□ 0.09
CBX4-204ENST00000495122 MRPS35P82673 323 aaKnown RBP15.64■□□□□ 0.09
CBX4-204ENST00000495122 TEAD4Q15561 434 aa15.64■□□□□ 0.09
CBX4-204ENST00000495122 CCSMST1Q4G0I0 132 aa15.64■□□□□ 0.09
CBX4-204ENST00000495122 NXPE4Q6UWF7 544 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms