RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 SEC16AO15027 2179 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 A0A1B0GX78 115 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 TRBC2A0A5B9 178 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 PROCP04070 461 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 TAC1P20366 129 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 ITGAXP20702 1163 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 HRH2P25021 359 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 CRHR1P34998 444 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 CCR10P46092 362 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 RAB8AP61006 207 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 ABHD18Q0P651 414 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 RBBP7Q16576 425 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 CPSF6Q16630 551 aaKnown RBP eCLIP10.59□□□□□ -0.71
APTX-230ENST00000494649 PRTGQ2VWP7 1150 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 ATG9BQ674R7 924 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 TMIGD1Q6UXZ0 262 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 CCNYL1Q8N7R7 359 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 BANPQ8N9N5 519 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 MFSD9Q8NBP5 474 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 OR9A4Q8NGU2 314 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 TCP10LQ8TDR4 215 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 TRPC4APQ8TEL6 797 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 PPP4R1Q8TF05 950 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 COL26A1Q96A83 441 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 MTFMTQ96DP5 389 aaKnown RBP10.59□□□□□ -0.71
APTX-230ENST00000494649 APOPT1Q96IL0 206 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 ZNF285Q96NJ3 590 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 MECRQ9BV79 373 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 SHCBP1LQ9BZQ2 653 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 B3GNT4Q9C0J1 378 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 KLHL31Q9H511 634 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 PELI2Q9HAT8 420 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 PCTPQ9UKL6 214 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 GRID1Q9ULK0 1009 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 RNF11Q9Y3C5 154 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 A0A087WV48 116 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 G3V2L1 256 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 OR7A17O14581 309 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 PLIN3O60664 434 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 H2AFYO75367 372 aaKnown RBP10.59□□□□□ -0.71
APTX-230ENST00000494649 GSTA1P08263 222 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 SLC35G6P0C7Q6 338 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 MYL2P10916 166 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 SCTRP47872 440 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 OLR1P78380 273 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 SLC18A2Q05940 514 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 ERV3-1Q14264 604 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 PCBP2Q15366 365 aaKnown RBP eCLIP10.59□□□□□ -0.71
APTX-230ENST00000494649 COL28A1Q2UY09 1125 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 ZNF385CQ66K41 422 aaPredicted RBP10.59□□□□□ -0.71
APTX-230ENST00000494649 CCDC81Q6ZN84 652 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 KLHDC8AQ8IYD2 350 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 ENDOVQ8N8Q3 282 aaKnown RBP10.59□□□□□ -0.71
APTX-230ENST00000494649 KIAA1143Q96AT1 154 aaPredicted RBP10.59□□□□□ -0.71
APTX-230ENST00000494649 PTCD3Q96EY7 689 aaKnown RBP10.59□□□□□ -0.71
APTX-230ENST00000494649 MMABQ96EY8 250 aaPredicted RBP10.59□□□□□ -0.71
APTX-230ENST00000494649 RBCK1Q9BYM8 510 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 DPH1Q9BZG8 443 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 MLXIPLQ9NP71 852 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 SLC22A11Q9NSA0 550 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 GPRC5BQ9NZH0 403 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 IFT80Q9P2H3 777 aaPredicted RBP10.59□□□□□ -0.71
APTX-230ENST00000494649 CTSFQ9UBX1 484 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 ZFP69BQ9UJL9 534 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 ZNF490Q9ULM2 529 aaPredicted RBP10.59□□□□□ -0.71
APTX-230ENST00000494649 SRPK3Q9UPE1 567 aa10.59□□□□□ -0.71
APTX-230ENST00000494649 PKD1L2Q7Z442 2459 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 FITM1A5D6W6 292 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 C4orf51C9J302 202 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 SGK494L7N484 410 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 SAP18O00422 153 aaKnown RBP10.58□□□□□ -0.72
APTX-230ENST00000494649 NKX2-8O15522 239 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 DNAJB6O75190 326 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 WFS1O76024 890 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 ZNF888P0CJ79 500 aaPredicted RBP10.58□□□□□ -0.72
APTX-230ENST00000494649 AGXTP21549 392 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 ATP5F1P24539 256 aaPredicted RBP10.58□□□□□ -0.72
APTX-230ENST00000494649 NEK2P51955 445 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 ARSFP54793 590 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 DCDP81605 110 aaKnown RBP10.58□□□□□ -0.72
APTX-230ENST00000494649 DNASE1L3Q13609 305 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 MUM1Q2TAK8 710 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 FAM214AQ32MH5 1076 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 NKAIN1Q4KMZ8 207 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 DEFB134Q4QY38 66 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 ZNF678Q5SXM1 525 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 FAM198BQ6UWH4 519 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 EXOC3L1Q86VI1 746 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 STARD8Q92502 1023 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 HBEGFQ99075 208 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 MTERF1Q99551 399 aaKnown RBP10.58□□□□□ -0.72
APTX-230ENST00000494649 TMEM109Q9BVC6 243 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 DRC3Q9H069 523 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 ACTL8Q9H568 366 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 HCN3Q9P1Z3 774 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 TNPO3Q9Y5L0 923 aaKnown RBP10.58□□□□□ -0.72
APTX-230ENST00000494649 NBEAQ8NFP9 2946 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 ATMQ13315 3056 aa10.58□□□□□ -0.72
APTX-230ENST00000494649 KCNE1BA0A087WTH5 132 aa10.57□□□□□ -0.72
APTX-230ENST00000494649 ANKDD1BA6NHY2 528 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms