RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 ZNF432O94892 652 aa18.58■□□□□ 0.56
COL27A1-207ENST00000494090 HOXB2P14652 356 aa18.58■□□□□ 0.56
COL27A1-207ENST00000494090 LEPRP48357 1165 aaKnown RBP18.58■□□□□ 0.56
COL27A1-207ENST00000494090 GSCP56915 257 aaPredicted RBP18.58■□□□□ 0.56
COL27A1-207ENST00000494090 DECR1Q16698 335 aa18.58■□□□□ 0.56
COL27A1-207ENST00000494090 NPLOC4Q8TAT6 608 aa18.58■□□□□ 0.56
COL27A1-207ENST00000494090 HSH2DQ96JZ2 352 aa18.58■□□□□ 0.56
COL27A1-207ENST00000494090 TPT1P8Q9HAU6 139 aa18.58■□□□□ 0.56
COL27A1-207ENST00000494090 RNF11Q9Y3C5 154 aa18.58■□□□□ 0.56
COL27A1-207ENST00000494090 ECHS1P30084 290 aa18.58■□□□□ 0.56
COL27A1-207ENST00000494090 SLC11A1P49279 550 aa18.58■□□□□ 0.56
COL27A1-207ENST00000494090 C1orf220Q5T0J3 134 aa18.58■□□□□ 0.56
COL27A1-207ENST00000494090 ABCB7O75027 752 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 KAT7O95251 611 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 RLN2P04090 185 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 ZNF630Q2M218 657 aaPredicted RBP18.57■□□□□ 0.56
COL27A1-207ENST00000494090 PTCHD3Q3KNS1 767 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 ULK3Q6PHR2 472 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 C12orf40Q86WS4 652 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 C7orf57Q8NEG2 295 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 CYB5D2Q8WUJ1 264 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 IL4I1Q96RQ9 567 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 MND1Q9BWT6 205 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 NSUN3Q9H649 340 aaKnown RBP18.57■□□□□ 0.56
COL27A1-207ENST00000494090 TBC1D24Q9ULP9 559 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 PCDHGA10Q9Y5H3 936 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 C15orf39Q6ZRI6 1047 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 TMCO2Q7Z6W1 182 aaPredicted RBP18.57■□□□□ 0.56
COL27A1-207ENST00000494090 UBE2J2Q8N2K1 259 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 PEX13Q92968 403 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 UCK2Q9BZX2 261 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 DKK3Q9UBP4 350 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 UTS2RQ9UKP6 389 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 SDR16C5Q8N3Y7 309 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 RDH12Q96NR8 316 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 LTBP3Q9NS15 1303 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 TYRP14679 529 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 SMSP52788 366 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 BTN3A2P78410 334 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 MOGQ16653 247 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 P4HA3Q7Z4N8 544 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 CTU1Q7Z7A3 348 aaKnown RBP18.57■□□□□ 0.56
COL27A1-207ENST00000494090 OR4K17Q8NGC6 315 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 NFKBIDQ8NI38 313 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 SLC5A11Q8WWX8 675 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 C12orf43Q96C57 262 aaKnown RBP18.57■□□□□ 0.56
COL27A1-207ENST00000494090 SCGB3A2Q96PL1 93 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 ZNF382Q96SR6 550 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 FAM83CQ9BQN1 747 aa18.57■□□□□ 0.56
COL27A1-207ENST00000494090 FBRSL1Q9HCM7 1045 aaKnown RBP18.57■□□□□ 0.56
COL27A1-207ENST00000494090 M0QX08 132 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 BCHEP06276 602 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 ACSL1P33121 698 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 PRPF38BQ5VTL8 546 aaKnown RBP18.56■□□□□ 0.56
COL27A1-207ENST00000494090 LRRC66Q68CR7 880 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 KIAA1161Q6NSJ0 714 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 TUBA3EQ6PEY2 450 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 CLDN19Q8N6F1 224 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 C1orf216Q8TAB5 229 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 THRSPQ92748 146 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 SLC25A36Q96CQ1 311 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 FBXL20Q96IG2 436 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 PKP4Q99569 1192 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 TOR3AQ9H497 397 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 MARCH7Q9H992 704 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 LYARQ9NX58 379 aaKnown RBP18.56■□□□□ 0.56
COL27A1-207ENST00000494090 MALT1Q9UDY8 824 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 PCDHGA2Q9Y5H1 932 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 PRSS51A0A1B0GVH4 220 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 MTMR11A4FU01 709 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 SOCS5O75159 536 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 ACADVLP49748 655 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 TXNL4AP83876 142 aaKnown RBP18.56■□□□□ 0.56
COL27A1-207ENST00000494090 MC1RQ01726 317 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 PLGLB1Q02325 96 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 ST3GAL3Q11203 375 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 GPR68Q15743 365 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 TPRG1LQ5T0D9 272 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 H0YJX3 145 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 SDHDO14521 159 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 OR1I1O60431 355 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 INMTO95050 263 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 BDKRB1P46663 353 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 NPAS3Q8IXF0 933 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 AUTS2Q8WXX7 1259 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 NCSTNQ92542 709 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 TTYH1Q9H313 450 aaPredicted RBP18.56■□□□□ 0.56
COL27A1-207ENST00000494090 ACTL8Q9H568 366 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 ZNF639Q9UID6 485 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 MYH2Q9UKX2 1941 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 A0A075B6Q4 140 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 A0A0G2JN53 185 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 PROZP22891 400 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 TMIGD1Q6UXZ0 262 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 CMTM8Q8IZV2 173 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 KCT2Q8NC54 265 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 PROKR2Q8NFJ6 384 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 ZFP3Q96NJ6 502 aa18.56■□□□□ 0.56
COL27A1-207ENST00000494090 PSKH1P11801 424 aa18.55■□□□□ 0.56
COL27A1-207ENST00000494090 PLCZ1Q86YW0 608 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms