RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 CCNYL2Q5T2Q4 361 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 ATG9BQ674R7 924 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 SPESP1Q6UW49 350 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 GCNT7Q6ZNI0 430 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 DSG4Q86SJ6 1040 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 SYT12Q8IV01 421 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 ZNF547Q8IVP9 402 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.28□□□□□ -0.28
VCP-207ENST00000493886 CXorf40AQ8TE69 158 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 ZNF480Q8WV37 535 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 TANKQ92844 425 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 CPPED1Q9BRF8 314 aaPredicted RBP13.28□□□□□ -0.28
VCP-207ENST00000493886 B3GNT4Q9C0J1 378 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 PRSS16Q9NQE7 514 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 C8orf4Q9NR00 106 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 WARS2Q9UGM6 360 aaKnown RBP13.28□□□□□ -0.28
VCP-207ENST00000493886 DGKBQ9Y6T7 804 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 KIAA1549LQ6ZVL6 1849 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 GNGT2O14610 69 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 THRBP10828 461 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 ZNF8P17098 575 aaPredicted RBP13.28□□□□□ -0.28
VCP-207ENST00000493886 PRPS1L1P21108 318 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 PBX2P40425 430 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 P2RY2P41231 377 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 RUNX3Q13761 415 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 DAG1Q14118 895 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 LAPTM4AQ15012 233 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 MEP1AQ16819 746 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 FAM98BQ52LJ0 330 aaKnown RBP13.28□□□□□ -0.28
VCP-207ENST00000493886 OR4F3Q6IEY1 312 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 CRTC3Q6UUV7 619 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 USP51Q70EK9 711 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 R3HCC1LQ7Z5L2 792 aaKnown RBP13.28□□□□□ -0.28
VCP-207ENST00000493886 SYTL1Q8IYJ3 562 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 PARP8Q8N3A8 854 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 CPA6Q8N4T0 437 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 SPERTQ8NA61 448 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 TBC1D15Q8TC07 691 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 ZNF514Q96K75 400 aaPredicted RBP13.28□□□□□ -0.28
VCP-207ENST00000493886 IGFLR1Q9H665 355 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 GPRC5BQ9NZH0 403 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 THAP10Q9P2Z0 257 aaPredicted RBP13.28□□□□□ -0.28
VCP-207ENST00000493886 KCNE2Q9Y6J6 123 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 COL4A3Q01955 1670 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 SERPINB7O75635 380 aa13.27□□□□□ -0.28
VCP-207ENST00000493886 POP7O75817 140 aaKnown RBP13.27□□□□□ -0.28
VCP-207ENST00000493886 RAP2AP10114 183 aa13.27□□□□□ -0.28
VCP-207ENST00000493886 HSD3B1P14060 373 aa13.27□□□□□ -0.28
VCP-207ENST00000493886 HOXB9P17482 250 aaPredicted RBP13.27□□□□□ -0.28
VCP-207ENST00000493886 HSD3B2P26439 372 aa13.27□□□□□ -0.28
VCP-207ENST00000493886 DCKP27707 260 aa13.27□□□□□ -0.28
VCP-207ENST00000493886 PTPN6P29350 595 aa13.27□□□□□ -0.28
VCP-207ENST00000493886 GJA4P35212 333 aa13.27□□□□□ -0.28
VCP-207ENST00000493886 CDKN2CP42773 168 aa13.27□□□□□ -0.28
VCP-207ENST00000493886 KIR3DL1P43629 444 aa13.27□□□□□ -0.28
VCP-207ENST00000493886 HLCSP50747 726 aa13.27□□□□□ -0.28
VCP-207ENST00000493886 ACSM2AQ08AH3 577 aa13.27□□□□□ -0.28
VCP-207ENST00000493886 ACSM2BQ68CK6 577 aa13.27□□□□□ -0.28
VCP-207ENST00000493886 MSANTD1Q6ZTZ1 278 aa13.27□□□□□ -0.28
VCP-207ENST00000493886 TRMT11Q7Z4G4 463 aaKnown RBP13.27□□□□□ -0.28
VCP-207ENST00000493886 MICU2Q8IYU8 434 aa13.27□□□□□ -0.28
VCP-207ENST00000493886 SCAIQ8N9R8 606 aa13.27□□□□□ -0.28
VCP-207ENST00000493886 NEIL2Q969S2 332 aa13.27□□□□□ -0.28
VCP-207ENST00000493886 LINC00615Q96LM1 132 aaPredicted RBP13.27□□□□□ -0.28
VCP-207ENST00000493886 BRF2Q9HAW0 419 aa13.27□□□□□ -0.28
VCP-207ENST00000493886 ADGRE2Q9UHX3 823 aa13.27□□□□□ -0.28
VCP-207ENST00000493886 HCN2Q9UL51 889 aa13.27□□□□□ -0.28
VCP-207ENST00000493886 RUVBL1Q9Y265 456 aaKnown RBP13.27□□□□□ -0.28
VCP-207ENST00000493886 SH3PXD2BA1X283 911 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 MAGEB17A8MXT2 336 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 CXCR6O00574 342 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 KCNJ13O60928 360 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 CST1P01037 141 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 ALPLP05186 524 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 AGXTP21549 392 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 ALDH3A2P51648 485 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 TBPL1P62380 186 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 CNTN1Q12860 1018 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 MTAPQ13126 283 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 ADNP2Q6IQ32 1131 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 CAPN13Q6MZZ7 669 aaPredicted RBP13.27□□□□□ -0.29
VCP-207ENST00000493886 DHRS4L2Q6PKH6 230 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 GPR149Q86SP6 731 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 CALHM3Q86XJ0 350 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 OR7G3Q8NG95 312 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 OR7A2PQ8NGA2 310 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 ADAMTS16Q8TE57 1224 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 FAM120BQ96EK7 910 aaKnown RBP13.27□□□□□ -0.29
VCP-207ENST00000493886 HDAC8Q9BY41 377 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 LHPPQ9H008 270 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 DZANK1Q9NVP4 752 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 AASSQ9UDR5 926 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 PCDHGA8Q9Y5G5 932 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 DENND4AQ7Z401 1863 aa13.27□□□□□ -0.29
VCP-207ENST00000493886 C17orf113A0A1B0GUU1 675 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 LOC105371267A0A1B0GV96 52 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 TRIM64A6NGJ6 449 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 NOTOA8MTQ0 251 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 FAM220BPB1ANY3 271 aa13.26□□□□□ -0.29
VCP-207ENST00000493886 PTGES3LE9PB15 166 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms