RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 HSD3B2P26439 372 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 CCR10P46092 362 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 RPL14P50914 215 aaKnown RBP11.04□□□□□ -0.64
LSM2-214ENST00000493387 VSX2P58304 361 aaPredicted RBP11.04□□□□□ -0.64
LSM2-214ENST00000493387 STXBP1P61764 594 aaKnown RBP11.04□□□□□ -0.64
LSM2-214ENST00000493387 TGM3Q08188 693 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 GRM7Q14831 915 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 GPR19Q15760 415 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 NDUFA9Q16795 377 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 FAM214AQ32MH5 1076 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 TUBB8Q3ZCM7 444 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.04□□□□□ -0.64
LSM2-214ENST00000493387 SH2D4BQ5SQS7 431 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 WASHC2DQ5SRD0 308 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 TMEM164Q5U3C3 297 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 GARNL3Q5VVW2 1013 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 CEACAM20Q6UY09 585 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 RNF165Q6ZSG1 346 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 PPP1R3BQ86XI6 285 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 CRLF3Q8IUI8 442 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 PLD3Q8IV08 490 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.04□□□□□ -0.64
LSM2-214ENST00000493387 CSNK1A1LQ8N752 337 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 BMPERQ8N8U9 685 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 GBP7Q8N8V2 638 aaPredicted RBP11.04□□□□□ -0.64
LSM2-214ENST00000493387 TTC29Q8NA56 475 aaPredicted RBP11.04□□□□□ -0.64
LSM2-214ENST00000493387 ZNF740Q8NDX6 193 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 SRFBP1Q8NEF9 429 aaKnown RBP11.04□□□□□ -0.64
LSM2-214ENST00000493387 WDR20Q8TBZ3 569 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 NT5CQ8TCD5 201 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 SELENOMQ8WWX9 145 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 CCT6BQ92526 530 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 ZNF501Q96CX3 271 aaPredicted RBP11.04□□□□□ -0.64
LSM2-214ENST00000493387 TM4SF19Q96DZ7 209 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 C7orf26Q96N11 449 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 TEFMQ96QE5 360 aaKnown RBP11.04□□□□□ -0.64
LSM2-214ENST00000493387 OR6C1Q96RD1 312 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 TAAR9Q96RI9 348 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 CENPKQ9BS16 269 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 ASPSCR1Q9BZE9 553 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 SPNS1Q9H2V7 528 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 CCDC134Q9H6E4 229 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 BRF2Q9HAW0 419 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 OCIAD1Q9NX40 245 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 SLC39A1Q9NY26 324 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 PCDHGA8Q9Y5G5 932 aa11.04□□□□□ -0.64
LSM2-214ENST00000493387 LOC105369274A0A096LPK9 316 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 LOC102723532A0A0G2JNH3 316 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 A0A1B0GTL3 188 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 SERTM1A2A2V5 107 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 FITM1A5D6W6 292 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 FFAR3O14843 346 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 GPR42O15529 346 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 NRP2O60462 931 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 LYPLA1O75608 230 aaPredicted RBP11.03□□□□□ -0.64
LSM2-214ENST00000493387 EIF2S1P05198 315 aaKnown RBP11.03□□□□□ -0.64
LSM2-214ENST00000493387 PTX3P26022 381 aaPredicted RBP11.03□□□□□ -0.64
LSM2-214ENST00000493387 ARSFP54793 590 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 CLDN6P56747 220 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 OCRLQ01968 901 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 PRTGQ2VWP7 1150 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 TMEM35AQ53FP2 167 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 DCAF12Q5T6F0 453 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 KANK2Q63ZY3 851 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 FRMPD2BQ6IN97 320 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 NIPAL1Q6NVV3 410 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 CHSY3Q70JA7 882 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 DGLUCYQ7Z3D6 616 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 VN1R4Q7Z5H5 301 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 OR4N4Q8N0Y3 316 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 ANKRD53Q8N9V6 530 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 HUS1BQ8NHY5 278 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 CREB3L4Q8TEY5 395 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 ZNF473Q8WTR7 871 aaKnown RBP11.03□□□□□ -0.64
LSM2-214ENST00000493387 USP7Q93009 1102 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 CMTM7Q96FZ5 175 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 SORT1Q99523 831 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 SERPINI1Q99574 410 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 DDA1Q9BW61 102 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 SHCBP1LQ9BZQ2 653 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 NRSN2Q9GZP1 204 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 POLR1BQ9H9Y6 1135 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 VTI1BQ9UEU0 232 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 ZDHHC2Q9UIJ5 367 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 SRPK3Q9UPE1 567 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 PCDHGA3Q9Y5H0 932 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 MYO15AQ9UKN7 3530 aa11.03□□□□□ -0.64
LSM2-214ENST00000493387 A0A088AWK7 358 aa11.02□□□□□ -0.65
LSM2-214ENST00000493387 SLC28A1O00337 649 aa11.02□□□□□ -0.65
LSM2-214ENST00000493387 NDUFS4O43181 175 aa11.02□□□□□ -0.65
LSM2-214ENST00000493387 SERPIND1P05546 499 aa11.02□□□□□ -0.65
LSM2-214ENST00000493387 CCL4P13236 92 aa11.02□□□□□ -0.65
LSM2-214ENST00000493387 ZNF10P21506 573 aaPredicted RBP11.02□□□□□ -0.65
LSM2-214ENST00000493387 RBMS1P29558 406 aaKnown RBP11.02□□□□□ -0.65
LSM2-214ENST00000493387 ARRB2P32121 409 aa11.02□□□□□ -0.65
LSM2-214ENST00000493387 ARFIP1P53367 373 aa11.02□□□□□ -0.65
LSM2-214ENST00000493387 SKP1P63208 163 aa11.02□□□□□ -0.65
LSM2-214ENST00000493387 CYP4F2P78329 520 aa11.02□□□□□ -0.65
LSM2-214ENST00000493387 CSTF3Q12996 717 aaKnown RBP11.02□□□□□ -0.65
LSM2-214ENST00000493387 DDX39BQ13838 428 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms