RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 ATL1Q8WXF7 558 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 C11orf24Q96F05 449 aaPredicted RBP12.39□□□□□ -0.43
PRAME-213ENST00000492657 DTD2Q96FN9 168 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 COQ10AQ96MF6 247 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 VPS35Q96QK1 796 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 MYOCQ99972 504 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 RBM4BQ9BQ04 359 aaKnown RBP12.39□□□□□ -0.43
PRAME-213ENST00000492657 RBM4Q9BWF3 364 aaKnown RBP12.39□□□□□ -0.43
PRAME-213ENST00000492657 YTHDF1Q9BYJ9 559 aaKnown RBP12.39□□□□□ -0.43
PRAME-213ENST00000492657 CEP290O15078 2479 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 MYO1GB0I1T2 1018 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 H0YIV9 168 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 EPN2O95208 641 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 C1orf105O95561 183 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 ABCB1P08183 1280 aaPredicted RBP12.39□□□□□ -0.43
PRAME-213ENST00000492657 CYP4B1P13584 511 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 CCNA2P20248 432 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 AQP1P29972 269 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 ALDH4A1P30038 563 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 NFATC3Q12968 1075 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 KCNC3Q14003 757 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 MAPK11Q15759 364 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 VMACQ2NL98 169 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 BROXQ5VW32 411 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 TTC23Q5W5X9 447 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 SLCO4C1Q6ZQN7 724 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 IGFN1Q86VF2 1251 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 CYP4Z1Q86W10 505 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 NLRP8Q86W28 1048 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 SVOPLQ8N434 492 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 ZNF557Q8N988 423 aaPredicted RBP12.39□□□□□ -0.43
PRAME-213ENST00000492657 ZNF784Q8NCA9 323 aaPredicted RBP12.39□□□□□ -0.43
PRAME-213ENST00000492657 SNX19Q92543 992 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 MAL2Q969L2 176 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 TAMM41Q96BW9 452 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 DUSP26Q9BV47 211 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 SPNS1Q9H2V7 528 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 MAGIXQ9H6Y5 334 aa12.39□□□□□ -0.43
PRAME-213ENST00000492657 NFKBIL1Q9UBC1 381 aaPredicted RBP12.39□□□□□ -0.43
PRAME-213ENST00000492657 EXO1Q9UQ84 846 aaKnown RBP12.39□□□□□ -0.43
PRAME-213ENST00000492657 UGDHO60701 494 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 LILRB5O75023 590 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 CCNDBP1O95273 360 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 CRHBPP24387 322 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 KDELR2P33947 212 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 IDUAP35475 653 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 HNF4AP41235 474 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 TBPL1P62380 186 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 VLDLRP98155 873 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 ZNF658BQ4V348 819 aaPredicted RBP12.38□□□□□ -0.43
PRAME-213ENST00000492657 FNDC3BQ53EP0 1204 aaKnown RBP12.38□□□□□ -0.43
PRAME-213ENST00000492657 TMEM240Q5SV17 173 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 RAET1GQ6H3X3 334 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 TMC5Q6UXY8 1006 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 ZNF555Q8NEP9 628 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 OR13F1Q8NGS4 319 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 HPS1Q92902 700 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 OTUB2Q96DC9 234 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 FAM83CQ9BQN1 747 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 LHPPQ9H008 270 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 SIAEQ9HAT2 523 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 TPT1P8Q9HAU6 139 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 USE1Q9NZ43 259 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 SH3BP4Q9P0V3 963 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 WARS2Q9UGM6 360 aaKnown RBP12.38□□□□□ -0.43
PRAME-213ENST00000492657 LOC100130705A0A1B0GUX0 176 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 GNG14A0A1W2PPG7 69 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 KRBA1A5PL33 1030 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 SCAMP2O15127 329 aaKnown RBP12.38□□□□□ -0.43
PRAME-213ENST00000492657 SRPRAP08240 638 aaKnown RBP12.38□□□□□ -0.43
PRAME-213ENST00000492657 HTR1AP08908 422 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 INHBBP09529 407 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 NPPBP16860 134 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 GPX2P18283 190 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 LSM3P62310 102 aaKnown RBP12.38□□□□□ -0.43
PRAME-213ENST00000492657 MC1RQ01726 317 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 GAB1Q13480 694 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 ZNF385BQ569K4 471 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 C6orf141Q5SZD1 244 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 C9orf64Q5T6V5 341 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 CPTPQ5TA50 214 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 CPZQ66K79 652 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 PDE12Q6L8Q7 609 aaKnown RBP12.38□□□□□ -0.43
PRAME-213ENST00000492657 DSG4Q86SJ6 1040 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 SERPINA11Q86U17 422 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 ZNF547Q8IVP9 402 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 TERB1Q8NA31 727 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 ZNF740Q8NDX6 193 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 OR4K1Q8NGD4 311 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 OR8J2Q8NGG1 315 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 CHTF18Q8WVB6 975 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 FOPNLQ96NB1 174 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 IL17FQ96PD4 163 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 CSF3RQ99062 836 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 DGCR6LQ9BY27 220 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 RAD18Q9NS91 495 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 DAPK2Q9UIK4 370 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 TMEM98Q9Y2Y6 226 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 PTGES3LE9PB15 166 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 NDUFB5O43674 189 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms