RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	FAM109A	Q8N4B1	249 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	C2orf73	Q8N5S3	287 aa	Predicted RBP	4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	TMEM156	Q8N614	296 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	TMEM251	Q8N6I4	163 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	ZNF441	Q8N8Z8	693 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	CCNY	Q8ND76	341 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	OR2M7	Q8NG81	312 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	SYN2	Q92777	582 aa	Predicted RBP	4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	SPATA13	Q96N96	652 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	TNFRSF13C	Q96RJ3	184 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	LPAR4	Q99677	370 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	BPIFA3	Q9BQP9	254 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	WDR83	Q9BRX9	315 aa	Known RBP	4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	SYT11	Q9BT88	431 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	HSD3B7	Q9H2F3	369 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	SLCO5A1	Q9H2Y9	848 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	SH2D2A	Q9NP31	389 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	TIMMDC1	Q9NPL8	285 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	LUC7L	Q9NQ29	371 aa	Known RBP	4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	DEPP	Q9NTK1	212 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	AIPL1	Q9NZN9	384 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	JKAMP	Q9P055	326 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	MYO1A	Q9UBC5	1043 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	SPRR3	Q9UBC9	169 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	KCNS2	Q9ULS6	477 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	LAMP3	Q9UQV4	416 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	ASF1A	Q9Y294	204 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	TESMIN	Q9Y4I5	508 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	PCDHA3	Q9Y5H8	950 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	FAM169A	Q9Y6X4	670 aa		4.99	□□□□□ -1.61
SEC13-219	ENST00000492602	HEATR5A	Q86XA9	2040 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602		A0A0A6YYC8	382 aa	Predicted RBP	4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	TRGV5	A0A0B4J1U4	118 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	TMEM89	A2RUT3	159 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	TMEM191C	A6NGB0	347 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	ARHGEF33	A8MVX0	844 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602		G3V3Y1	287 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602		I3L1I5	382 aa	Predicted RBP	4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	SGTA	O43765	313 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	ERN1	O75460	977 aa	Known RBP	4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	SNRNP200	O75643	2136 aa	Known RBP	4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	SERPING1	P05155	500 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	MMP2	P08253	660 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	VSIG8	P0DPA2	414 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	ZFX	P17010	805 aa	Predicted RBP	4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	ENDOU	P21128	410 aa	Known RBP	4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	CRYGS	P22914	178 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	CTSS	P25774	331 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	MIP	P30301	263 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	CETN2	P41208	172 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	SLC26A5	P58743	744 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	MMRN1	Q13201	1228 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	USP10	Q14694	798 aa	Known RBP	4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	PDK2	Q15119	407 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	PCSK7	Q16549	785 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	ACSF3	Q4G176	576 aa	Predicted RBP	4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	FBLN7	Q53RD9	439 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	NDUFAF5	Q5TEU4	345 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	IRF2BP2	Q7Z5L9	587 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	LACC1	Q8IV20	430 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	LMNTD1	Q8N9Z9	388 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	PSD4	Q8NDX1	1056 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	ELP5	Q8TE02	316 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	HSPH1	Q92598	858 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	ZUFSP	Q96AP4	578 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	SLC22A18	Q96BI1	424 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	FAF2	Q96CS3	445 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	HSPBAP1	Q96EW2	488 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	MVB12A	Q96EY5	273 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	DCUN1D1	Q96GG9	259 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	BTBD6	Q96KE9	485 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	ART5	Q96L15	291 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	WFIKKN1	Q96NZ8	548 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	QRFPR	Q96P65	431 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	CSPG4P5	Q96PW8	444 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	RHNO1	Q9BSD3	238 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	MED18	Q9BUE0	208 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	HAUS4	Q9H6D7	363 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	KCMF1	Q9P0J7	381 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	AMACR	Q9UHK6	382 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	POLG2	Q9UHN1	485 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	METRN	Q9UJH8	293 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	ERVK-11	Q9UQG0	969 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	SPO11	Q9Y5K1	396 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	ROS1	P08922	2347 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	KIAA1549	Q9HCM3	1950 aa		4.98	□□□□□ -1.61
SEC13-219	ENST00000492602	ARHGAP21	Q5T5U3	1957 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	IGHV4-30-2	A0A087WSY4	118 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602		A0A0G2JMM0	328 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602		A0A1W2PPB8	328 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602		A0A1W2PRS3	328 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	FEZF1	A0PJY2	475 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	FAM234B	A2RU67	622 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	SLC35F4	A4IF30	521 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	LRRC53	A6NM62	1247 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	KIR3DP1	A8MWS1	328 aa		4.97	□□□□□ -1.61
SEC13-219	ENST00000492602	AHRR	A9YTQ3	701 aa		4.97	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms