RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 LCMT2O60294 686 aaKnown RBP14.3□□□□□ -0.12
USP39-217ENST00000491659 WDR47O94967 919 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 WISP3O95389 354 aaPredicted RBP14.3□□□□□ -0.12
USP39-217ENST00000491659 C1QAP02745 245 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 SERPIND1P05546 499 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 CCDC166P0CW27 439 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 RAB10P61026 200 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 ATP6V0D1P61421 351 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 SKP1P63208 163 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 REEP5Q00765 189 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 EEF1A2Q05639 463 aaKnown RBP14.3□□□□□ -0.12
USP39-217ENST00000491659 RGS1Q08116 209 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 SLMAPQ14BN4 828 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 CATSPEREQ5SY80 951 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 MFSD4BQ5TF39 518 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 FAAH2Q6GMR7 532 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 CEP128Q6ZU80 1094 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 PRSS41Q7RTY9 318 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 LAPTM4BQ86VI4 370 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 PARP9Q8IXQ6 854 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 TCAIMQ8N3R3 496 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 ZADH2Q8N4Q0 377 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 KCT2Q8NC54 265 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 MNS1Q8NEH6 495 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 CPT1CQ8TCG5 803 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 FBF1Q8TES7 1133 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 THOC3Q96J01 351 aaKnown RBP14.3□□□□□ -0.12
USP39-217ENST00000491659 AIF1LQ9BQI0 150 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 UNKQ9C0B0 810 aaKnown RBP14.3□□□□□ -0.12
USP39-217ENST00000491659 LHPPQ9H008 270 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 ZNF160Q9HCG1 818 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 LRRC4CQ9HCJ2 640 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 RIC8BQ9NVN3 520 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 LUZP4Q9P127 313 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 HCN3Q9P1Z3 774 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 MTRF1LQ9UGC7 380 aaKnown RBP14.3□□□□□ -0.12
USP39-217ENST00000491659 PLAAQ9Y263 795 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 SLC22A14Q9Y267 594 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 SCN3AQ9NY46 2000 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 NCF1BA6NI72 391 aaPredicted RBP14.29□□□□□ -0.12
USP39-217ENST00000491659 NCF1CA8MVU1 366 aaPredicted RBP14.29□□□□□ -0.12
USP39-217ENST00000491659 SGK494L7N484 410 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 S100BP04271 92 aaPredicted RBP14.29□□□□□ -0.12
USP39-217ENST00000491659 CYC1P08574 325 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 COX6A1P12074 109 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 NCF1P14598 390 aaPredicted RBP14.29□□□□□ -0.12
USP39-217ENST00000491659 AHRP35869 848 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 XCR1P46094 333 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 GUCY2DQ02846 1103 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 PWP1Q13610 501 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 HERC3Q15034 1050 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 TGFBIQ15582 683 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 ZKSCAN8Q15776 578 aaPredicted RBP14.29□□□□□ -0.12
USP39-217ENST00000491659 AGAP7PQ5VUJ5 663 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 ATG9BQ674R7 924 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 NIPAL1Q6NVV3 410 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 NXPE4Q6UWF7 544 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 IGFL3Q6UXB1 125 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 RAPH1Q70E73 1250 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 NDUFAF7Q7L592 441 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 OR51Q1Q8NH59 317 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 METTL21AQ8WXB1 218 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 RHBDF1Q96CC6 855 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 AGAP4Q96P64 663 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 ILKAPQ9H0C8 392 aaPredicted RBP14.29□□□□□ -0.12
USP39-217ENST00000491659 SPNS1Q9H2V7 528 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 WWOXQ9NZC7 414 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 ZFP69BQ9UJL9 534 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 MKL2Q9ULH7 1088 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 SLC22A7Q9Y694 548 aa14.29□□□□□ -0.12
USP39-217ENST00000491659 A0A1W2PQ72 361 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 KIF2AO00139 706 aaPredicted RBP14.28□□□□□ -0.12
USP39-217ENST00000491659 RDH16O75452 317 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 KLHL18O94889 574 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 BMP10O95393 424 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 TUBB4AP04350 444 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 UQCRHP07919 91 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 C8orf89P0DMQ9 161 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 CD1DP15813 335 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 GNAZP19086 355 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 VARSP26640 1264 aaKnown RBP14.28□□□□□ -0.12
USP39-217ENST00000491659 PHBP35232 272 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 SCTRP47872 440 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 SLC6A12P48065 614 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 CD97P48960 835 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 SNRPNP63162 240 aaKnown RBP14.28□□□□□ -0.12
USP39-217ENST00000491659 EFTUD2Q15029 972 aaKnown RBP eCLIP14.28□□□□□ -0.123e-8■■□□□ 13.7
USP39-217ENST00000491659 MINDY4Q4G0A6 757 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 ABHD13Q7L211 337 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 GPSM1Q86YR5 675 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 KBTBD2Q8IY47 623 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 KLHDC8AQ8IYD2 350 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 SPATA6LQ8N4H0 392 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 ZNF740Q8NDX6 193 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 NT5CQ8TCD5 201 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 MESP1Q9BRJ9 268 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 EPS8L2Q9H6S3 715 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 CNOT10Q9H9A5 744 aaKnown RBP14.28□□□□□ -0.12
USP39-217ENST00000491659 ZDHHC18Q9NUE0 388 aa14.28□□□□□ -0.12
USP39-217ENST00000491659 MAP10Q9P2G4 905 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms