RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 PTGFRNQ9P2B2 879 aa26.3■■□□□ 1.8
HOXB3-211ENST00000490677 PLEKHB1Q9UF11 243 aaPredicted RBP26.3■■□□□ 1.8
HOXB3-211ENST00000490677 CRYBG3Q68DQ2 2970 aa26.3■■□□□ 1.8
HOXB3-211ENST00000490677 CROCCQ5TZA2 2017 aa26.29■■□□□ 1.8
HOXB3-211ENST00000490677 CCDC188H7C350 402 aa26.29■■□□□ 1.8
HOXB3-211ENST00000490677 SGK494L7N484 410 aa26.29■■□□□ 1.8
HOXB3-211ENST00000490677 ITGAMP11215 1152 aa26.29■■□□□ 1.8
HOXB3-211ENST00000490677 CAPN13Q6MZZ7 669 aaPredicted RBP26.29■■□□□ 1.8
HOXB3-211ENST00000490677 RIPOR1Q6ZS17 1223 aa26.29■■□□□ 1.8
HOXB3-211ENST00000490677 LANCL3Q6ZV70 420 aa26.29■■□□□ 1.8
HOXB3-211ENST00000490677 ASPGQ86U10 573 aa26.29■■□□□ 1.8
HOXB3-211ENST00000490677 SIRT6Q8N6T7 355 aa26.29■■□□□ 1.8
HOXB3-211ENST00000490677 CAMKVQ8NCB2 501 aa26.29■■□□□ 1.8
HOXB3-211ENST00000490677 ST6GALNAC3Q8NDV1 305 aa26.29■■□□□ 1.8
HOXB3-211ENST00000490677 OR51Q1Q8NH59 317 aa26.29■■□□□ 1.8
HOXB3-211ENST00000490677 ALKBH8Q96BT7 664 aaKnown RBP26.29■■□□□ 1.8
HOXB3-211ENST00000490677 MOCOSQ96EN8 888 aa26.29■■□□□ 1.8
HOXB3-211ENST00000490677 CNDP1Q96KN2 507 aa26.29■■□□□ 1.8
HOXB3-211ENST00000490677 HAUS8Q9BT25 410 aa26.29■■□□□ 1.8
HOXB3-211ENST00000490677 SPNS1Q9H2V7 528 aa26.29■■□□□ 1.8
HOXB3-211ENST00000490677 HCN3Q9P1Z3 774 aa26.29■■□□□ 1.8
HOXB3-211ENST00000490677 OR2W5A6NFC9 320 aa26.28■■□□□ 1.8
HOXB3-211ENST00000490677 LDLRP01130 860 aa26.28■■□□□ 1.8
HOXB3-211ENST00000490677 HIST1H2AGP0C0S8 130 aaPredicted RBP26.28■■□□□ 1.8
HOXB3-211ENST00000490677 ZNF37AP17032 561 aaPredicted RBP26.28■■□□□ 1.8
HOXB3-211ENST00000490677 HIST1H2ADP20671 130 aa26.28■■□□□ 1.8
HOXB3-211ENST00000490677 RPL21P46778 160 aaKnown RBP26.28■■□□□ 1.8
HOXB3-211ENST00000490677 ARL4CP56559 192 aa26.28■■□□□ 1.8
HOXB3-211ENST00000490677 MEF2AQ02078 507 aaPredicted RBP26.28■■□□□ 1.8
HOXB3-211ENST00000490677 RPUSD3Q6P087 351 aaKnown RBP26.28■■□□□ 1.8
HOXB3-211ENST00000490677 ZC3HC1Q86WB0 502 aaKnown RBP26.28■■□□□ 1.8
HOXB3-211ENST00000490677 AFAP1L2Q8N4X5 818 aa26.28■■□□□ 1.8
HOXB3-211ENST00000490677 ZCCHC10Q8TBK6 192 aa26.28■■□□□ 1.8
HOXB3-211ENST00000490677 SLC13A3Q8WWT9 602 aa26.28■■□□□ 1.8
HOXB3-211ENST00000490677 HIST1H2AHQ96KK5 128 aa26.28■■□□□ 1.8
HOXB3-211ENST00000490677 CYTH2Q99418 400 aa26.28■■□□□ 1.8
HOXB3-211ENST00000490677 HIST1H2AJQ99878 128 aa26.28■■□□□ 1.8
HOXB3-211ENST00000490677 H2AFJQ9BTM1 129 aa26.28■■□□□ 1.8
HOXB3-211ENST00000490677 SLC22A7Q9Y694 548 aa26.28■■□□□ 1.8
HOXB3-211ENST00000490677 TEX15Q9BXT5 2789 aa26.28■■□□□ 1.8
HOXB3-211ENST00000490677 CTAGE15A4D2H0 777 aa26.27■■□□□ 1.8
HOXB3-211ENST00000490677 CYC1P08574 325 aa26.27■■□□□ 1.8
HOXB3-211ENST00000490677 ENO2P09104 434 aaPredicted RBP26.27■■□□□ 1.8
HOXB3-211ENST00000490677 C8orf89P0DMQ9 161 aa26.27■■□□□ 1.8
HOXB3-211ENST00000490677 XCR1P46094 333 aa26.27■■□□□ 1.8
HOXB3-211ENST00000490677 TNFSF10P50591 281 aa26.27■■□□□ 1.8
HOXB3-211ENST00000490677 CDC16Q13042 620 aa26.27■■□□□ 1.8
HOXB3-211ENST00000490677 CTAGE6Q86UF2 777 aa26.27■■□□□ 1.8
HOXB3-211ENST00000490677 ZNF740Q8NDX6 193 aa26.27■■□□□ 1.8
HOXB3-211ENST00000490677 FAR1Q8WVX9 515 aa26.27■■□□□ 1.8
HOXB3-211ENST00000490677 HAS2Q92819 552 aa26.27■■□□□ 1.8
HOXB3-211ENST00000490677 FAM129AQ9BZQ8 928 aa26.27■■□□□ 1.8
HOXB3-211ENST00000490677 TRIM31Q9BZY9 425 aa26.27■■□□□ 1.8
HOXB3-211ENST00000490677 AGPAT4Q9NRZ5 378 aa26.27■■□□□ 1.8
HOXB3-211ENST00000490677 PLA2G3Q9NZ20 509 aa26.27■■□□□ 1.8
HOXB3-211ENST00000490677 IGHV3-20A0A0C4DH32 117 aa26.26■■□□□ 1.79
HOXB3-211ENST00000490677 RDH16O75452 317 aa26.26■■□□□ 1.79
HOXB3-211ENST00000490677 DDAH2O95865 285 aa26.26■■□□□ 1.79
HOXB3-211ENST00000490677 MGAT5Q09328 741 aa26.26■■□□□ 1.79
HOXB3-211ENST00000490677 PDIA2Q13087 525 aaKnown RBP26.26■■□□□ 1.79
HOXB3-211ENST00000490677 ZNF460Q14592 562 aa26.26■■□□□ 1.79
HOXB3-211ENST00000490677 CATSPEREQ5SY80 951 aa26.26■■□□□ 1.79
HOXB3-211ENST00000490677 FBXO36Q8NEA4 188 aa26.26■■□□□ 1.79
HOXB3-211ENST00000490677 NEIL2Q969S2 332 aa26.26■■□□□ 1.79
HOXB3-211ENST00000490677 SLX1AQ9BQ83 275 aa26.26■■□□□ 1.79
HOXB3-211ENST00000490677 TUBB6Q9BUF5 446 aa26.26■■□□□ 1.79
HOXB3-211ENST00000490677 NAALAD2Q9Y3Q0 740 aa26.26■■□□□ 1.79
HOXB3-211ENST00000490677 CENPEQ02224 2701 aa26.26■■□□□ 1.79
HOXB3-211ENST00000490677 TRBC2A0A5B9 178 aa26.25■■□□□ 1.79
HOXB3-211ENST00000490677 CDC7O00311 574 aa26.25■■□□□ 1.79
HOXB3-211ENST00000490677 DNAJB6O75190 326 aa26.25■■□□□ 1.79
HOXB3-211ENST00000490677 CCR8P51685 355 aa26.25■■□□□ 1.79
HOXB3-211ENST00000490677 ZNF324BQ6AW86 544 aaPredicted RBP26.25■■□□□ 1.79
HOXB3-211ENST00000490677 STRA8Q7Z7C7 330 aa26.25■■□□□ 1.79
HOXB3-211ENST00000490677 ANKHQ9HCJ1 492 aa26.25■■□□□ 1.79
HOXB3-211ENST00000490677 SMYD2Q9NRG4 433 aa26.25■■□□□ 1.79
HOXB3-211ENST00000490677 LANCL2Q9NS86 450 aa26.25■■□□□ 1.79
HOXB3-211ENST00000490677 ZFATQ9P243 1243 aa26.25■■□□□ 1.79
HOXB3-211ENST00000490677 SNX24Q9Y343 169 aa26.25■■□□□ 1.79
HOXB3-211ENST00000490677 CELSR2Q9HCU4 2923 aa26.25■■□□□ 1.79
HOXB3-211ENST00000490677 EFCAB8A8MWE9 144 aa26.24■■□□□ 1.79
HOXB3-211ENST00000490677 SEC24DO94855 1032 aaPredicted RBP26.24■■□□□ 1.79
HOXB3-211ENST00000490677 WISP3O95389 354 aaPredicted RBP26.24■■□□□ 1.79
HOXB3-211ENST00000490677 GUCA1CO95843 209 aa26.24■■□□□ 1.79
HOXB3-211ENST00000490677 GRK3P35626 688 aa26.24■■□□□ 1.79
HOXB3-211ENST00000490677 TAS2R39P59534 338 aa26.24■■□□□ 1.79
HOXB3-211ENST00000490677 MRPS25P82663 173 aaKnown RBP26.24■■□□□ 1.79
HOXB3-211ENST00000490677 CPEB2Q7Z5Q1 589 aaKnown RBP26.24■■□□□ 1.79
HOXB3-211ENST00000490677 ANKRD37Q7Z713 158 aa26.24■■□□□ 1.79
HOXB3-211ENST00000490677 CEP97Q8IW35 865 aa26.24■■□□□ 1.79
HOXB3-211ENST00000490677 OR5T3Q8NGG3 340 aa26.24■■□□□ 1.79
HOXB3-211ENST00000490677 OR1N1Q8NGS0 311 aa26.24■■□□□ 1.79
HOXB3-211ENST00000490677 ANKRD49Q8WVL7 239 aa26.24■■□□□ 1.79
HOXB3-211ENST00000490677 ANKRD7Q92527 254 aa26.24■■□□□ 1.79
HOXB3-211ENST00000490677 TAAR6Q96RI8 345 aa26.24■■□□□ 1.79
HOXB3-211ENST00000490677 KRT12Q99456 494 aa26.24■■□□□ 1.79
HOXB3-211ENST00000490677 ITPR2Q14571 2701 aa26.24■■□□□ 1.79
HOXB3-211ENST00000490677 FAM95CA0A1B0GW59 222 aa26.23■■□□□ 1.79
HOXB3-211ENST00000490677 OR1F1O43749 312 aa26.23■■□□□ 1.79
HOXB3-211ENST00000490677 SLC35G6P0C7Q6 338 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms