RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 REEP5Q00765 189 aa18.72■□□□□ 0.59
SMC4-222ENST00000490207 WHAMMP3Q1A5X7 153 aa18.72■□□□□ 0.59
SMC4-222ENST00000490207 KBTBD12Q3ZCT8 623 aa18.72■□□□□ 0.59
SMC4-222ENST00000490207 ATG9BQ674R7 924 aa18.72■□□□□ 0.59
SMC4-222ENST00000490207 FAAH2Q6GMR7 532 aa18.72■□□□□ 0.59
SMC4-222ENST00000490207 TMPRSS11BQ86T26 416 aa18.72■□□□□ 0.59
SMC4-222ENST00000490207 Q8NA96 180 aa18.72■□□□□ 0.59
SMC4-222ENST00000490207 KCT2Q8NC54 265 aa18.72■□□□□ 0.59
SMC4-222ENST00000490207 LHPPQ9H008 270 aa18.72■□□□□ 0.59
SMC4-222ENST00000490207 SPNS1Q9H2V7 528 aa18.72■□□□□ 0.59
SMC4-222ENST00000490207 PELI2Q9HAT8 420 aa18.72■□□□□ 0.59
SMC4-222ENST00000490207 ZNF160Q9HCG1 818 aa18.72■□□□□ 0.59
SMC4-222ENST00000490207 ANKHQ9HCJ1 492 aa18.72■□□□□ 0.59
SMC4-222ENST00000490207 LRRC4CQ9HCJ2 640 aa18.72■□□□□ 0.59
SMC4-222ENST00000490207 SLAMF7Q9NQ25 335 aa18.72■□□□□ 0.59
SMC4-222ENST00000490207 HCN3Q9P1Z3 774 aa18.72■□□□□ 0.59
SMC4-222ENST00000490207 STMN1P16949 149 aa18.71■□□□□ 0.59
SMC4-222ENST00000490207 HNMTP50135 292 aa18.71■□□□□ 0.59
SMC4-222ENST00000490207 Q0VFX4 171 aa18.71■□□□□ 0.59
SMC4-222ENST00000490207 IGFL3Q6UXB1 125 aa18.71■□□□□ 0.59
SMC4-222ENST00000490207 PPM1NQ8N819 430 aa18.71■□□□□ 0.59
SMC4-222ENST00000490207 FBF1Q8TES7 1133 aa18.71■□□□□ 0.59
SMC4-222ENST00000490207 THOC3Q96J01 351 aaKnown RBP18.71■□□□□ 0.59
SMC4-222ENST00000490207 LRRC1Q9BTT6 524 aa18.71■□□□□ 0.59
SMC4-222ENST00000490207 MKL2Q9ULH7 1088 aa18.71■□□□□ 0.59
SMC4-222ENST00000490207 SLC22A14Q9Y267 594 aa18.71■□□□□ 0.59
SMC4-222ENST00000490207 NSG1A0A0A6YYJ2 146 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 NCF1BA6NI72 391 aaPredicted RBP18.7■□□□□ 0.58
SMC4-222ENST00000490207 NCF1CA8MVU1 366 aaPredicted RBP18.7■□□□□ 0.58
SMC4-222ENST00000490207 SGK494L7N484 410 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 PCDH17O14917 1159 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 WDR47O94967 919 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 BMP10O95393 424 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 SERPIND1P05546 499 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 CCDC166P0CW27 439 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 NCF1P14598 390 aaPredicted RBP18.7■□□□□ 0.58
SMC4-222ENST00000490207 SPRP35270 261 aaPredicted RBP18.7■□□□□ 0.58
SMC4-222ENST00000490207 RAB10P61026 200 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 NAB1Q13506 487 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 SLMAPQ14BN4 828 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 TGFBIQ15582 683 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 ZKSCAN8Q15776 578 aaPredicted RBP18.7■□□□□ 0.58
SMC4-222ENST00000490207 GRTP1Q5TC63 336 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 MFSD4BQ5TF39 518 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 AGAP7PQ5VUJ5 663 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 NXPE4Q6UWF7 544 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 NDUFAF7Q7L592 441 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 SPATA6LQ8N4H0 392 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 ZADH2Q8N4Q0 377 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 ZNF740Q8NDX6 193 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 ZNF592Q92610 1267 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 RHBDF1Q96CC6 855 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 AGAP4Q96P64 663 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 AIF1LQ9BQI0 150 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 ZBTB20Q9HC78 741 aaPredicted RBP18.7■□□□□ 0.58
SMC4-222ENST00000490207 KCNE2Q9Y6J6 123 aa18.7■□□□□ 0.58
SMC4-222ENST00000490207 SHANK1Q9Y566 2161 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 IGHV1-45A0A0A0MS14 117 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 A0A1W2PQ72 361 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 RDH16O75452 317 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 JRKO75564 520 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 KLHL18O94889 574 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 CD1DP15813 335 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 XCR1P46094 333 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 SCTRP47872 440 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 SLC6A12P48065 614 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 EFNA3P52797 238 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 RGS1Q08116 209 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 PWP1Q13610 501 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 EFTUD2Q15029 972 aaKnown RBP eCLIP18.69■□□□□ 0.581e-5■■□□□ 12.6
SMC4-222ENST00000490207 HERC3Q15034 1050 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 C18orf21Q32NC0 220 aaPredicted RBP18.69■□□□□ 0.58
SMC4-222ENST00000490207 PRR30Q53SZ7 412 aaPredicted RBP18.69■□□□□ 0.58
SMC4-222ENST00000490207 PDSS2Q86YH6 399 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 KLHDC8AQ8IYD2 350 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 OR51Q1Q8NH59 317 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 MOCOSQ96EN8 888 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 ILKAPQ9H0C8 392 aaPredicted RBP18.69■□□□□ 0.58
SMC4-222ENST00000490207 ZDHHC18Q9NUE0 388 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 RIC8BQ9NVN3 520 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 WWOXQ9NZC7 414 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 ZFP69BQ9UJL9 534 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 B3GNT3Q9Y2A9 372 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 NAALAD2Q9Y3Q0 740 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 SLC22A7Q9Y694 548 aa18.69■□□□□ 0.58
SMC4-222ENST00000490207 LOC102723996A0A087X1L8 192 aa18.68■□□□□ 0.58
SMC4-222ENST00000490207 ZNF860A6NHJ4 632 aa18.68■□□□□ 0.58
SMC4-222ENST00000490207 FAM155BO75949 473 aa18.68■□□□□ 0.58
SMC4-222ENST00000490207 CYC1P08574 325 aa18.68■□□□□ 0.58
SMC4-222ENST00000490207 C8orf89P0DMQ9 161 aa18.68■□□□□ 0.58
SMC4-222ENST00000490207 AHRP35869 848 aa18.68■□□□□ 0.58
SMC4-222ENST00000490207 ATP6V0D1P61421 351 aa18.68■□□□□ 0.58
SMC4-222ENST00000490207 GUCY2DQ02846 1103 aa18.68■□□□□ 0.58
SMC4-222ENST00000490207 INPP5JQ15735 1006 aaPredicted RBP18.68■□□□□ 0.58
SMC4-222ENST00000490207 MINDY4Q4G0A6 757 aa18.68■□□□□ 0.58
SMC4-222ENST00000490207 TMEM205Q6UW68 189 aa18.68■□□□□ 0.58
SMC4-222ENST00000490207 KBTBD2Q8IY47 623 aa18.68■□□□□ 0.58
SMC4-222ENST00000490207 TCAIMQ8N3R3 496 aa18.68■□□□□ 0.58
SMC4-222ENST00000490207 AFAP1L2Q8N4X5 818 aa18.68■□□□□ 0.58
SMC4-222ENST00000490207 NT5CQ8TCD5 201 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms