RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 ARL6IP1Q15041 203 aa8.6□□□□□ -1.03
LSAMP-205ENST00000490035 VMACQ2NL98 169 aa8.6□□□□□ -1.03
LSAMP-205ENST00000490035 ACSBG2Q5FVE4 666 aa8.6□□□□□ -1.03
LSAMP-205ENST00000490035 NCBP2-AS2Q69YL0 99 aa8.6□□□□□ -1.03
LSAMP-205ENST00000490035 NCEH1Q6PIU2 408 aa8.6□□□□□ -1.03
LSAMP-205ENST00000490035 TMIGD1Q6UXZ0 262 aa8.6□□□□□ -1.03
LSAMP-205ENST00000490035 ANKRD46Q86W74 232 aa8.6□□□□□ -1.03
LSAMP-205ENST00000490035 COQ8BQ96D53 544 aa8.6□□□□□ -1.03
LSAMP-205ENST00000490035 DEFB118Q96PH6 123 aa8.6□□□□□ -1.03
LSAMP-205ENST00000490035 CARD8Q9Y2G2 431 aa8.6□□□□□ -1.03
LSAMP-205ENST00000490035 NOX1Q9Y5S8 564 aa8.6□□□□□ -1.03
LSAMP-205ENST00000490035 MLLT6P55198 1093 aaPredicted RBP8.59□□□□□ -1.03
LSAMP-205ENST00000490035 CDKL4Q5MAI5 379 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 TMEM214Q6NUQ4 689 aaKnown RBP8.59□□□□□ -1.03
LSAMP-205ENST00000490035 CEACAM20Q6UY09 585 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 NPAS3Q8IXF0 933 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 SETD7Q8WTS6 366 aaKnown RBP8.59□□□□□ -1.03
LSAMP-205ENST00000490035 ADAD1Q96M93 576 aaKnown RBP8.59□□□□□ -1.03
LSAMP-205ENST00000490035 ABCB9Q9NP78 766 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 UTS2RQ9UKP6 389 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 CNOT11Q9UKZ1 510 aaKnown RBP8.59□□□□□ -1.03
LSAMP-205ENST00000490035 OAZ3Q9UMX2 235 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 ABCG2Q9UNQ0 655 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 HYKKA2RU49 373 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 A8MT66 165 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 PDYNP01213 254 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 DEFB132Q7Z7B7 95 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 NLE1Q9NVX2 485 aaPredicted RBP8.59□□□□□ -1.03
LSAMP-205ENST00000490035 SLC7A8Q9UHI5 535 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 PRDM4Q9UKN5 801 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 MAU2Q9Y6X3 613 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 LRRTM2O43300 516 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 MATN1P21941 496 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 DCDC1P59894 354 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 CYP4F8P98187 520 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 SLC36A3Q495N2 470 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 HACD2Q6Y1H2 254 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 ZNF565Q8N9K5 539 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 BBS10Q8TAM1 723 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 SLC35F5Q8WV83 523 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 TMEM121BQ9BXQ6 578 aaPredicted RBP8.59□□□□□ -1.03
LSAMP-205ENST00000490035 OR2AG1Q9H205 316 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 MARCH7Q9H992 704 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 TAS2R10Q9NYW0 307 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 PACSIN3Q9UKS6 424 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 HLA-DQB2P05538 268 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 CLUP10909 449 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 GP1BBP13224 206 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 SDHAF4Q5VUM1 108 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 PLD6Q8N2A8 252 aaKnown RBP8.59□□□□□ -1.03
LSAMP-205ENST00000490035 TFAP2BQ92481 460 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 ORAI3Q9BRQ5 295 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 OARD1Q9Y530 152 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 PDE4DIPQ5VU43 2346 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 HTR1AP08908 422 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 MTPNP58546 118 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 EFR3AQ14156 821 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 FAM214AQ32MH5 1076 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 ZNF404Q494X3 552 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 TPRG1LQ5T0D9 272 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 ZDHHC24Q6UX98 284 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 ZSCAN4Q8NAM6 433 aaPredicted RBP8.59□□□□□ -1.03
LSAMP-205ENST00000490035 C17orf50Q8WW18 174 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 MTERF1Q99551 399 aaKnown RBP8.59□□□□□ -1.03
LSAMP-205ENST00000490035 VRK1Q99986 396 aaPredicted RBP8.59□□□□□ -1.03
LSAMP-205ENST00000490035 BRD7Q9NPI1 651 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 SNTG1Q9NSN8 517 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 ARL5AQ9Y689 179 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 PEX12O00623 359 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 AGTR1P30556 359 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 TPTEP56180 551 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 BTN3A2P78410 334 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 GPR153Q6NV75 609 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 RFWD3Q6PCD5 774 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 KCTD18Q6PI47 426 aaPredicted RBP8.59□□□□□ -1.03
LSAMP-205ENST00000490035 FAM129CQ86XR2 697 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 FEM1AQ9BSK4 669 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 ASB6Q9NWX5 421 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 SIGLEC1Q9BZZ2 1709 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 SHROOM3Q8TF72 1996 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 A0A096LPI6 279 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 SLC25A11Q02978 314 aaKnown RBP8.59□□□□□ -1.03
LSAMP-205ENST00000490035 PAQR3Q6TCH7 311 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 DCDC5Q6ZRR9 648 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 THOC6Q86W42 341 aaKnown RBP8.59□□□□□ -1.03
LSAMP-205ENST00000490035 SLC22A15Q8IZD6 547 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 PLA2G15Q8NCC3 412 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 ZDHHC12Q96GR4 267 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 LAMP5Q9UJQ1 280 aa8.59□□□□□ -1.03
LSAMP-205ENST00000490035 KDM4BO94953 1096 aa8.58□□□□□ -1.04
LSAMP-205ENST00000490035 MSX2P35548 267 aaPredicted RBP8.58□□□□□ -1.04
LSAMP-205ENST00000490035 STC1P52823 247 aa8.58□□□□□ -1.04
LSAMP-205ENST00000490035 GALNT1Q10472 559 aaPredicted RBP8.58□□□□□ -1.04
LSAMP-205ENST00000490035 MAD2L1BPQ15013 274 aaPredicted RBP8.58□□□□□ -1.04
LSAMP-205ENST00000490035 SOWAHAQ2M3V2 549 aa8.58□□□□□ -1.04
LSAMP-205ENST00000490035 TMEM35AQ53FP2 167 aa8.58□□□□□ -1.04
LSAMP-205ENST00000490035 SMARCD3Q6STE5 483 aa8.58□□□□□ -1.04
LSAMP-205ENST00000490035 RNF19BQ6ZMZ0 732 aa8.58□□□□□ -1.04
LSAMP-205ENST00000490035 FCAMRQ8WWV6 532 aa8.58□□□□□ -1.04
LSAMP-205ENST00000490035 BMFQ96LC9 184 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms