RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 AP1M2Q9Y6Q5 423 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 CACNA1HO95180 2353 aa13.56□□□□□ -0.24
VPS26A-205ENST00000489656 FEZF1A0PJY2 475 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 TRIM38O00635 465 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 ANKRD28O15084 1053 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 ZW10O43264 779 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 THRAP10827 490 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 ESRRAP11474 423 aaPredicted RBP13.55□□□□□ -0.24
VPS26A-205ENST00000489656 BCKDHAP12694 445 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 TYRP1P17643 537 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 MAGP20916 626 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 JAK1P23458 1154 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 BCL6P41182 706 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 LSSP48449 732 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 MNAT1P51948 309 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 NCALDP61601 193 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 GPLD1P80108 840 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 ACSM2AQ08AH3 577 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 RPS6KA2Q15349 733 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 ZIC1Q15915 447 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 LPAL2Q16609 132 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 DEPDC1Q5TB30 811 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 ACSM2BQ68CK6 577 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 CYP20A1Q6UW02 462 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 TRIM73Q86UV7 250 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 GATAD2AQ86YP4 633 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 FUNDC1Q8IVP5 155 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 CARFQ8N187 725 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 METTL4Q8N3J2 472 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 BAHD1Q8TBE0 780 aaPredicted RBP13.55□□□□□ -0.24
VPS26A-205ENST00000489656 CREB3L4Q8TEY5 395 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 CD180Q99467 661 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 ARRDC1-AS1Q9H2J1 176 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 ACTR5Q9H9F9 607 aaPredicted RBP13.55□□□□□ -0.24
VPS26A-205ENST00000489656 EVA1BQ9NVM1 165 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 PILRAQ9UKJ1 303 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 PCDHGB2Q9Y5G2 931 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 R4GN57 208 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 SCN3AQ9NY46 2000 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 WDFY4Q6ZS81 3184 aa13.55□□□□□ -0.24
VPS26A-205ENST00000489656 IGHV1OR21-1A0A087WYE8 117 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 LY6G6EA0A0G2JKS1 128 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 KHNYNO15037 678 aaKnown RBP13.54□□□□□ -0.24
VPS26A-205ENST00000489656 NRP2O60462 931 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 MYO1DO94832 1006 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 TGFB1P01137 390 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 G6PDP11413 515 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 ENGP17813 658 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 TIA1P31483 386 aaKnown RBP eCLIP13.54□□□□□ -0.24
VPS26A-205ENST00000489656 RASSF2P50749 326 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 HNRNPH2P55795 449 aaKnown RBP13.54□□□□□ -0.24
VPS26A-205ENST00000489656 C21orf58P58505 322 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 CYLC2Q14093 348 aaPredicted RBP13.54□□□□□ -0.24
VPS26A-205ENST00000489656 NR0B2Q15466 257 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 ADPRMQ3LIE5 342 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 TMEM35AQ53FP2 167 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 AGKQ53H12 422 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 KHDRBS2Q5VWX1 349 aaKnown RBP13.54□□□□□ -0.24
VPS26A-205ENST00000489656 NOXRED1Q6NXP6 359 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 RNF44Q7L0R7 432 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 PLD3Q8IV08 490 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 LIX1Q8N485 282 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 SLC7A6OSQ96CW6 309 aaPredicted RBP13.54□□□□□ -0.24
VPS26A-205ENST00000489656 TM4SF19Q96DZ7 209 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 APOLD1Q96LR9 279 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 PRRX2Q99811 253 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 COL25A1Q9BXS0 654 aaPredicted RBP13.54□□□□□ -0.24
VPS26A-205ENST00000489656 CHRNA10Q9GZZ6 450 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 ACTL8Q9H568 366 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 C1GALT1Q9NS00 363 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 AHSPQ9NZD4 102 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 PADI4Q9UM07 663 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 DLGAP4Q9Y2H0 992 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 U3KQA8 63 aa13.54□□□□□ -0.24
VPS26A-205ENST00000489656 DYTNA2CJ06 578 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 FAM234BA2RU67 622 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 TLCD2A6NGC4 264 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 SIGLEC6O43699 453 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 PRMT3O60678 531 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 SLC22A3O75751 556 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 SNRPB2P08579 225 aaKnown RBP13.53□□□□□ -0.24
VPS26A-205ENST00000489656 SDC1P18827 310 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 ZFP36L2P47974 494 aaKnown RBP13.53□□□□□ -0.24
VPS26A-205ENST00000489656 CLDN8P56748 225 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 PPP1CAP62136 330 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 RAE1P78406 368 aaKnown RBP13.53□□□□□ -0.24
VPS26A-205ENST00000489656 DMTNQ08495 405 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 SQSTM1Q13501 440 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 PWP1Q13610 501 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 RCAN2Q14206 197 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 FBXO42Q6P3S6 717 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 PAOXQ6QHF9 649 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 BLOC1S3Q6QNY0 202 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 GK5Q6ZS86 529 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 SNX32Q86XE0 403 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 C1orf52Q8N6N3 182 aaKnown RBP13.53□□□□□ -0.24
VPS26A-205ENST00000489656 POU5F2Q8N7G0 328 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 GLB1L3Q8NCI6 653 aaPredicted RBP13.53□□□□□ -0.24
VPS26A-205ENST00000489656 OR9I1Q8NGQ6 314 aa13.53□□□□□ -0.24
VPS26A-205ENST00000489656 NT5CQ8TCD5 201 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms