RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 POLR2JP52435 117 aaKnown RBP20.72■□□□□ 0.91
SMC4-221ENST00000489573 DNAL1Q4LDG9 190 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 KHDRBS2Q5VWX1 349 aaKnown RBP20.72■□□□□ 0.91
SMC4-221ENST00000489573 KANSL1Q7Z3B3 1105 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 METTL4Q8N3J2 472 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 EFCAB1Q9HAE3 211 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 NLGN3Q9NZ94 848 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 BAIAP2L1Q9UHR4 511 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 POMT2Q9UKY4 750 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 SLC6A14Q9UN76 642 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 PCDHGA4Q9Y5G9 962 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 RNF215Q9Y6U7 377 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 KMT2EQ8IZD2 1858 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 SDK1Q7Z5N4 2213 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 SAP18O00422 153 aaKnown RBP20.72■□□□□ 0.91
SMC4-221ENST00000489573 TBX6O95947 436 aaPredicted RBP20.72■□□□□ 0.91
SMC4-221ENST00000489573 HOXB3P14651 431 aaPredicted RBP20.72■□□□□ 0.91
SMC4-221ENST00000489573 CAPN3P20807 821 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 TACR1P25103 407 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 CPOXP36551 454 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 EPHA4P54764 986 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 RPS15AP62244 130 aaKnown RBP20.72■□□□□ 0.91
SMC4-221ENST00000489573 KCNJ2P63252 427 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 RAE1P78406 368 aaKnown RBP20.72■□□□□ 0.91
SMC4-221ENST00000489573 LPAL2Q16609 132 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 MMEL1Q495T6 779 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 TRIM61Q5EBN2 209 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 DEPDC1Q5TB30 811 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 REP15Q6BDI9 236 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 GALNT18Q6P9A2 607 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 SLC23A3Q6PIS1 610 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 FIGLAQ6QHK4 219 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 COMMD6Q7Z4G1 85 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 SLC35F3Q8IY50 421 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 CLHC1Q8NHS4 586 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 CREB3L4Q8TEY5 395 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 ZUFSPQ96AP4 578 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 SPDL1Q96EA4 605 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 TSSK3Q96PN8 268 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 NPAS2Q99743 824 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 GAREM1Q9H706 876 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 EVA1BQ9NVM1 165 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 AHSPQ9NZD4 102 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 AP1M2Q9Y6Q5 423 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 PATE3B3GLJ2 98 aa20.71■□□□□ 0.91
SMC4-221ENST00000489573 FBP2O00757 339 aa20.71■□□□□ 0.91
SMC4-221ENST00000489573 NUDT21O43809 227 aaKnown RBP20.71■□□□□ 0.91
SMC4-221ENST00000489573 NQO1P15559 274 aaKnown RBP20.71■□□□□ 0.91
SMC4-221ENST00000489573 LSSP48449 732 aa20.71■□□□□ 0.91
SMC4-221ENST00000489573 CCT8P50990 548 aa20.71■□□□□ 0.91
SMC4-221ENST00000489573 CLDN8P56748 225 aa20.71■□□□□ 0.91
SMC4-221ENST00000489573 PPP1CAP62136 330 aa20.71■□□□□ 0.91
SMC4-221ENST00000489573 SLC25A3Q00325 362 aa20.71■□□□□ 0.91
SMC4-221ENST00000489573 CYP4F3Q08477 520 aa20.71■□□□□ 0.91
SMC4-221ENST00000489573 VPS26BQ4G0F5 336 aa20.71■□□□□ 0.91
SMC4-221ENST00000489573 FCRL6Q6DN72 434 aa20.71■□□□□ 0.91
SMC4-221ENST00000489573 GLB1L3Q8NCI6 653 aaPredicted RBP20.71■□□□□ 0.91
SMC4-221ENST00000489573 TRPV3Q8NET8 790 aa20.71■□□□□ 0.91
SMC4-221ENST00000489573 SAP25Q8TEE9 199 aa20.71■□□□□ 0.91
SMC4-221ENST00000489573 CENPKQ9BS16 269 aa20.71■□□□□ 0.91
SMC4-221ENST00000489573 DUSP23Q9BVJ7 150 aa20.71■□□□□ 0.91
SMC4-221ENST00000489573 SLC52A3Q9NQ40 469 aa20.71■□□□□ 0.91
SMC4-221ENST00000489573 LRIT1Q9P2V4 623 aa20.71■□□□□ 0.91
SMC4-221ENST00000489573 CACNA1EQ15878 2313 aa20.7■□□□□ 0.9
SMC4-221ENST00000489573 DYTNA2CJ06 578 aa20.7■□□□□ 0.9
SMC4-221ENST00000489573 MRASO14807 208 aa20.7■□□□□ 0.9
SMC4-221ENST00000489573 ANGPT2O15123 496 aa20.7■□□□□ 0.9
SMC4-221ENST00000489573 NDUFS4O43181 175 aa20.7■□□□□ 0.9
SMC4-221ENST00000489573 GALR2O43603 387 aaPredicted RBP20.7■□□□□ 0.9
SMC4-221ENST00000489573 PCDH7O60245 1069 aa20.7■□□□□ 0.9
SMC4-221ENST00000489573 SERPIND1P05546 499 aa20.7■□□□□ 0.9
SMC4-221ENST00000489573 KRT16P08779 473 aa20.7■□□□□ 0.9
SMC4-221ENST00000489573 ALPPL2P10696 532 aa20.7■□□□□ 0.9
SMC4-221ENST00000489573 ITGAXP20702 1163 aa20.7■□□□□ 0.9
SMC4-221ENST00000489573 RAP1GDS1P52306 607 aa20.7■□□□□ 0.9
SMC4-221ENST00000489573 CLNS1AP54105 237 aaKnown RBP20.7■□□□□ 0.9
SMC4-221ENST00000489573 ART3Q13508 389 aa20.7■□□□□ 0.9
SMC4-221ENST00000489573 ZIC1Q15915 447 aa20.7■□□□□ 0.9
SMC4-221ENST00000489573 ZNF438Q7Z4V0 828 aa20.7■□□□□ 0.9
SMC4-221ENST00000489573 GATAD2AQ86YP4 633 aa20.7■□□□□ 0.9
SMC4-221ENST00000489573 PIAS4Q8N2W9 510 aaPredicted RBP20.7■□□□□ 0.9
SMC4-221ENST00000489573 PPM1MQ96MI6 270 aa20.7■□□□□ 0.9
SMC4-221ENST00000489573 F2RL3Q96RI0 385 aa20.7■□□□□ 0.9
SMC4-221ENST00000489573 CADM1Q9BY67 442 aaKnown RBP20.7■□□□□ 0.9
SMC4-221ENST00000489573 ABCG4Q9H172 646 aa20.7■□□□□ 0.9
SMC4-221ENST00000489573 IL21RQ9HBE5 538 aa20.7■□□□□ 0.9
SMC4-221ENST00000489573 NDUFAF1Q9Y375 327 aa20.7■□□□□ 0.9
SMC4-221ENST00000489573 HEATR5BQ9P2D3 2071 aa20.7■□□□□ 0.9
SMC4-221ENST00000489573 CCDC154A6NI56 674 aa20.69■□□□□ 0.9
SMC4-221ENST00000489573 GSC2O15499 205 aa20.69■□□□□ 0.9
SMC4-221ENST00000489573 CER1O95813 267 aa20.69■□□□□ 0.9
SMC4-221ENST00000489573 ANXA4P09525 319 aaPredicted RBP20.69■□□□□ 0.9
SMC4-221ENST00000489573 PVRP15151 417 aa20.69■□□□□ 0.9
SMC4-221ENST00000489573 RELAQ04206 551 aa20.69■□□□□ 0.9
SMC4-221ENST00000489573 COQ5Q5HYK3 327 aa20.69■□□□□ 0.9
SMC4-221ENST00000489573 ZCCHC8Q6NZY4 707 aaKnown RBP20.69■□□□□ 0.9
SMC4-221ENST00000489573 C16orf89Q6UX73 402 aa20.69■□□□□ 0.9
SMC4-221ENST00000489573 KRTCAP2Q8N6L1 136 aa20.69■□□□□ 0.9
SMC4-221ENST00000489573 WDR48Q8TAF3 677 aa20.69■□□□□ 0.9
SMC4-221ENST00000489573 BAHD1Q8TBE0 780 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms