RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 NCALDP61601 193 aa19.98■□□□□ 0.79
SND1-214ENST00000489417 CYP4F3Q08477 520 aa19.98■□□□□ 0.79
SND1-214ENST00000489417 PLA2G2CQ5R387 149 aa19.98■□□□□ 0.79
SND1-214ENST00000489417 NOXRED1Q6NXP6 359 aa19.98■□□□□ 0.79
SND1-214ENST00000489417 C1orf52Q8N6N3 182 aaKnown RBP19.98■□□□□ 0.79
SND1-214ENST00000489417 FAM181AQ8N9Y4 354 aa19.98■□□□□ 0.79
SND1-214ENST00000489417 OR6C4Q8NGE1 309 aa19.98■□□□□ 0.79
SND1-214ENST00000489417 OR9I1Q8NGQ6 314 aa19.98■□□□□ 0.79
SND1-214ENST00000489417 RP9Q8TA86 221 aaKnown RBP19.98■□□□□ 0.79
SND1-214ENST00000489417 BAHD1Q8TBE0 780 aaPredicted RBP19.98■□□□□ 0.79
SND1-214ENST00000489417 CREB3L4Q8TEY5 395 aa19.98■□□□□ 0.79
SND1-214ENST00000489417 CCDC167Q9P0B6 97 aa19.98■□□□□ 0.79
SND1-214ENST00000489417 DLGAP4Q9Y2H0 992 aa19.98■□□□□ 0.79
SND1-214ENST00000489417 MUC3AQ02505 3323 aa19.98■□□□□ 0.79
SND1-214ENST00000489417 IGHV1OR21-1A0A087WYE8 117 aa19.97■□□□□ 0.79
SND1-214ENST00000489417 LOC100653049A0A140TA62 436 aa19.97■□□□□ 0.79
SND1-214ENST00000489417 KRT34O76011 436 aa19.97■□□□□ 0.79
SND1-214ENST00000489417 SEMA3DO95025 777 aa19.97■□□□□ 0.79
SND1-214ENST00000489417 TBX6O95947 436 aaPredicted RBP19.97■□□□□ 0.79
SND1-214ENST00000489417 SERPIND1P05546 499 aa19.97■□□□□ 0.79
SND1-214ENST00000489417 CPA2P48052 419 aa19.97■□□□□ 0.79
SND1-214ENST00000489417 OR1D5P58170 312 aa19.97■□□□□ 0.79
SND1-214ENST00000489417 UFM1P61960 85 aa19.97■□□□□ 0.79
SND1-214ENST00000489417 RELAQ04206 551 aa19.97■□□□□ 0.79
SND1-214ENST00000489417 CYLC2Q14093 348 aaPredicted RBP19.97■□□□□ 0.79
SND1-214ENST00000489417 ZIC1Q15915 447 aa19.97■□□□□ 0.79
SND1-214ENST00000489417 DEPDC1Q5TB30 811 aa19.97■□□□□ 0.79
SND1-214ENST00000489417 KHDRBS2Q5VWX1 349 aaKnown RBP19.97■□□□□ 0.79
SND1-214ENST00000489417 TCEAL6Q6IPX3 200 aa19.97■□□□□ 0.79
SND1-214ENST00000489417 METTL4Q8N3J2 472 aa19.97■□□□□ 0.79
SND1-214ENST00000489417 MINDY1Q8N5J2 469 aa19.97■□□□□ 0.79
SND1-214ENST00000489417 EID2Q8N6I1 236 aa19.97■□□□□ 0.79
SND1-214ENST00000489417 TRPV3Q8NET8 790 aa19.97■□□□□ 0.79
SND1-214ENST00000489417 TCEAL3Q969E4 200 aa19.97■□□□□ 0.79
SND1-214ENST00000489417 C11orf24Q96F05 449 aaPredicted RBP19.97■□□□□ 0.79
SND1-214ENST00000489417 AHCYL2Q96HN2 611 aaKnown RBP19.97■□□□□ 0.79
SND1-214ENST00000489417 RAB33BQ9H082 229 aa19.97■□□□□ 0.79
SND1-214ENST00000489417 TMEM45AQ9NWC5 275 aa19.97■□□□□ 0.79
SND1-214ENST00000489417 SIRT5Q9NXA8 310 aa19.97■□□□□ 0.79
SND1-214ENST00000489417 EPHA6Q9UF33 1036 aa19.97■□□□□ 0.79
SND1-214ENST00000489417 PI4KAP42356 2102 aa19.97■□□□□ 0.79
SND1-214ENST00000489417 SAP18O00422 153 aaKnown RBP19.96■□□□□ 0.79
SND1-214ENST00000489417 NDUFS4O43181 175 aa19.96■□□□□ 0.79
SND1-214ENST00000489417 SLC22A3O75751 556 aa19.96■□□□□ 0.79
SND1-214ENST00000489417 PCSK2P16519 638 aa19.96■□□□□ 0.79
SND1-214ENST00000489417 SDC1P18827 310 aa19.96■□□□□ 0.79
SND1-214ENST00000489417 TIA1P31483 386 aaKnown RBP eCLIP19.96■□□□□ 0.79
SND1-214ENST00000489417 ATXN3P54252 364 aaPredicted RBP19.96■□□□□ 0.79
SND1-214ENST00000489417 FBXO42Q6P3S6 717 aa19.96■□□□□ 0.79
SND1-214ENST00000489417 FUNDC1Q8IVP5 155 aa19.96■□□□□ 0.79
SND1-214ENST00000489417 FAM9CQ8IZT9 166 aa19.96■□□□□ 0.79
SND1-214ENST00000489417 CCDC74AQ96AQ1 378 aa19.96■□□□□ 0.79
SND1-214ENST00000489417 THAP11Q96EK4 314 aa19.96■□□□□ 0.79
SND1-214ENST00000489417 TRAPPC9Q96Q05 1148 aa19.96■□□□□ 0.79
SND1-214ENST00000489417 F2RL3Q96RI0 385 aa19.96■□□□□ 0.79
SND1-214ENST00000489417 EBPLQ9BY08 206 aa19.96■□□□□ 0.79
SND1-214ENST00000489417 ACTL8Q9H568 366 aa19.96■□□□□ 0.79
SND1-214ENST00000489417 SYNPO2LQ9H987 977 aa19.96■□□□□ 0.79
SND1-214ENST00000489417 ACTR5Q9H9F9 607 aaPredicted RBP19.96■□□□□ 0.79
SND1-214ENST00000489417 AHSPQ9NZD4 102 aa19.96■□□□□ 0.79
SND1-214ENST00000489417 PILRAQ9UKJ1 303 aa19.96■□□□□ 0.79
SND1-214ENST00000489417 LY6G6EA0A0G2JKS1 128 aa19.95■□□□□ 0.78
SND1-214ENST00000489417 NR5A2O00482 541 aa19.95■□□□□ 0.78
SND1-214ENST00000489417 ANKRD28O15084 1053 aa19.95■□□□□ 0.78
SND1-214ENST00000489417 CAPN5O15484 640 aaPredicted RBP19.95■□□□□ 0.78
SND1-214ENST00000489417 B4GAT1O43505 415 aa19.95■□□□□ 0.78
SND1-214ENST00000489417 DUX1O43812 170 aa19.95■□□□□ 0.78
SND1-214ENST00000489417 CTSVO60911 334 aa19.95■□□□□ 0.78
SND1-214ENST00000489417 SNRPB2P08579 225 aaKnown RBP19.95■□□□□ 0.78
SND1-214ENST00000489417 ST6GAL1P15907 406 aa19.95■□□□□ 0.78
SND1-214ENST00000489417 RASSF2P50749 326 aa19.95■□□□□ 0.78
SND1-214ENST00000489417 MNAT1P51948 309 aa19.95■□□□□ 0.78
SND1-214ENST00000489417 RAE1P78406 368 aaKnown RBP19.95■□□□□ 0.78
SND1-214ENST00000489417 GPLD1P80108 840 aa19.95■□□□□ 0.78
SND1-214ENST00000489417 PTGR1Q14914 329 aa19.95■□□□□ 0.78
SND1-214ENST00000489417 NKAIN2Q5VXU1 208 aa19.95■□□□□ 0.78
SND1-214ENST00000489417 COMMD6Q7Z4G1 85 aa19.95■□□□□ 0.78
SND1-214ENST00000489417 Q8N9G6 341 aaPredicted RBP19.95■□□□□ 0.78
SND1-214ENST00000489417 NCSTNQ92542 709 aa19.95■□□□□ 0.78
SND1-214ENST00000489417 SLC45A3Q96JT2 553 aa19.95■□□□□ 0.78
SND1-214ENST00000489417 TEX37Q96LM6 180 aa19.95■□□□□ 0.78
SND1-214ENST00000489417 TGM7Q96PF1 710 aa19.95■□□□□ 0.78
SND1-214ENST00000489417 ZFYVE21Q9BQ24 234 aa19.95■□□□□ 0.78
SND1-214ENST00000489417 CENPKQ9BS16 269 aa19.95■□□□□ 0.78
SND1-214ENST00000489417 C1GALT1Q9NS00 363 aa19.95■□□□□ 0.78
SND1-214ENST00000489417 BAIAP2L1Q9UHR4 511 aa19.95■□□□□ 0.78
SND1-214ENST00000489417 U3KQA8 63 aa19.95■□□□□ 0.78
SND1-214ENST00000489417 A0A0J9YVX5 310 aa19.94■□□□□ 0.78
SND1-214ENST00000489417 PCDH7O60245 1069 aa19.94■□□□□ 0.78
SND1-214ENST00000489417 ZNF883P0CG24 379 aa19.94■□□□□ 0.78
SND1-214ENST00000489417 PNLIPP16233 465 aa19.94■□□□□ 0.78
SND1-214ENST00000489417 JAK1P23458 1154 aa19.94■□□□□ 0.78
SND1-214ENST00000489417 HNRNPH1P31943 449 aaKnown RBP19.94■□□□□ 0.78
SND1-214ENST00000489417 RAP1GDS1P52306 607 aa19.94■□□□□ 0.78
SND1-214ENST00000489417 GFERP55789 205 aa19.94■□□□□ 0.78
SND1-214ENST00000489417 DMTNQ08495 405 aa19.94■□□□□ 0.78
SND1-214ENST00000489417 TMEM35AQ53FP2 167 aa19.94■□□□□ 0.78
SND1-214ENST00000489417 GALNT18Q6P9A2 607 aa19.94■□□□□ 0.78
SND1-214ENST00000489417 FAM92BQ6ZTR7 304 aa19.94■□□□□ 0.78
SND1-214ENST00000489417 RNF44Q7L0R7 432 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms