RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 TBL3Q12788 808 aaKnown RBP9.59□□□□□ -0.87
USP11-211ENST00000489111 KIAA0040Q15053 153 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 SHBQ15464 509 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 VPS26BQ4G0F5 336 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 TMEM35AQ53FP2 167 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 REP15Q6BDI9 236 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 ZCCHC8Q6NZY4 707 aaKnown RBP9.59□□□□□ -0.87
USP11-211ENST00000489111 ZC3H14Q6PJT7 736 aaKnown RBP9.59□□□□□ -0.87
USP11-211ENST00000489111 FIGLAQ6QHK4 219 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 BLOC1S3Q6QNY0 202 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 GATAD2AQ86YP4 633 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 SLC35F3Q8IY50 421 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 PCYOX1LQ8NBM8 494 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 MFSD9Q8NBP5 474 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 FLVCR1-AS1Q8TAF5 88 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 TSPEARQ8WU66 669 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 CHTF18Q8WVB6 975 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 SPDL1Q96EA4 605 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 THAP11Q96EK4 314 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 AHCYL2Q96HN2 611 aaKnown RBP9.59□□□□□ -0.87
USP11-211ENST00000489111 FCRL1Q96LA6 429 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 TSSK3Q96PN8 268 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 TWSG1Q9GZX9 223 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 EPB41L1Q9H4G0 881 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 CAPN10Q9HC96 672 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 LRIT1Q9P2V4 623 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 GMEB2Q9UKD1 530 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 MAPRE3Q9UPY8 281 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 NDUFAF1Q9Y375 327 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 PCDHGA4Q9Y5G9 962 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 AP1M2Q9Y6Q5 423 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 RNF215Q9Y6U7 377 aa9.59□□□□□ -0.87
USP11-211ENST00000489111 ZFC3H1O60293 1989 aaKnown RBP9.58□□□□□ -0.88
USP11-211ENST00000489111 PATE3B3GLJ2 98 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 ARHGAP33O14559 1287 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 ANKRD28O15084 1053 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 TNFSF14O43557 240 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 DUX1O43812 170 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 LCMT2O60294 686 aaKnown RBP9.58□□□□□ -0.88
USP11-211ENST00000489111 NRP2O60462 931 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 PRMT3O60678 531 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 EPN2O95208 641 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 SLC35G6P0C7Q6 338 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 PVRP15151 417 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 NQO1P15559 274 aaKnown RBP9.58□□□□□ -0.88
USP11-211ENST00000489111 GLB1P16278 677 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 CAPN3P20807 821 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 PRPS1L1P21108 318 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 ALDH4A1P30038 563 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 PGM1P36871 562 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 MPLP40238 635 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 SSR2P43308 183 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 NUBP1P53384 320 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 ATXN3P54252 364 aaPredicted RBP9.58□□□□□ -0.88
USP11-211ENST00000489111 CLDN8P56748 225 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 STXBP1P61764 594 aaKnown RBP9.58□□□□□ -0.88
USP11-211ENST00000489111 KCNJ2P63252 427 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 ZNF763Q0D2J5 394 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 NR0B2Q15466 257 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 GLIPR1L2Q4G1C9 344 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 COQ5Q5HYK3 327 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 TOR1AIP1Q5JTV8 583 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 DEPDC1Q5TB30 811 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 GALNT18Q6P9A2 607 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 SLC23A3Q6PIS1 610 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 ASPGQ86U10 573 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 NUDT13Q86X67 352 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 FUNDC1Q8IVP5 155 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 METTL4Q8N3J2 472 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 KRTCAP2Q8N6L1 136 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 OR4C6Q8NH72 309 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 BAHD1Q8TBE0 780 aaPredicted RBP9.58□□□□□ -0.88
USP11-211ENST00000489111 PROKR1Q8TCW9 393 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 SAP25Q8TEE9 199 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 RERGQ96A58 199 aaPredicted RBP9.58□□□□□ -0.88
USP11-211ENST00000489111 ZUFSPQ96AP4 578 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 RGMAQ96B86 450 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 ZDHHC12Q96GR4 267 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 LOXL4Q96JB6 756 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 SLC45A3Q96JT2 553 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 TEX37Q96LM6 180 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 F2RL3Q96RI0 385 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 NPAS2Q99743 824 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 ZFYVE21Q9BQ24 234 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 CCDC3Q9BQI4 270 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 SARGQ9BW04 601 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 GTPBP2Q9BX10 602 aaKnown RBP9.58□□□□□ -0.88
USP11-211ENST00000489111 REXO4Q9GZR2 422 aaKnown RBP9.58□□□□□ -0.88
USP11-211ENST00000489111 KLHL25Q9H0H3 589 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 C1orf21Q9H246 121 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 SEMA6CQ9H3T2 930 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 ACTL8Q9H568 366 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 SIRT5Q9NXA8 310 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 TAS2R1Q9NYW7 299 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 BAIAP2L1Q9UHR4 511 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 MCM8Q9UJA3 840 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 LEF1Q9UJU2 399 aaPredicted RBP9.58□□□□□ -0.88
USP11-211ENST00000489111 PADI4Q9UM07 663 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 PCDHGA5Q9Y5G8 931 aa9.58□□□□□ -0.88
USP11-211ENST00000489111 KLK4Q9Y5K2 254 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms