RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 CHPT1Q8WUD6 406 aa25.17■■□□□ 1.62
HLA-C-208ENST00000487245 ING5Q8WYH8 240 aa25.17■■□□□ 1.62
HLA-C-208ENST00000487245 BARD1Q99728 777 aaKnown RBP25.17■■□□□ 1.62
HLA-C-208ENST00000487245 APOL4Q9BPW4 351 aa25.17■■□□□ 1.62
HLA-C-208ENST00000487245 ASPSCR1Q9BZE9 553 aa25.17■■□□□ 1.62
HLA-C-208ENST00000487245 NDRG4Q9ULP0 352 aaKnown RBP25.17■■□□□ 1.62
HLA-C-208ENST00000487245 KCNE2Q9Y6J6 123 aa25.17■■□□□ 1.62
HLA-C-208ENST00000487245 H3BM21 787 aa25.17■■□□□ 1.62
HLA-C-208ENST00000487245 NPC1O15118 1278 aa25.17■■□□□ 1.62
HLA-C-208ENST00000487245 BDKRB1P46663 353 aa25.17■■□□□ 1.62
HLA-C-208ENST00000487245 GRIN2CQ14957 1233 aa25.17■■□□□ 1.62
HLA-C-208ENST00000487245 GALNT18Q6P9A2 607 aa25.17■■□□□ 1.62
HLA-C-208ENST00000487245 SLC15A4Q8N697 577 aa25.17■■□□□ 1.62
HLA-C-208ENST00000487245 ABHD11Q8NFV4 315 aa25.17■■□□□ 1.62
HLA-C-208ENST00000487245 OR10Q1Q8NGQ4 319 aa25.17■■□□□ 1.62
HLA-C-208ENST00000487245 OR4K3Q96R72 315 aa25.17■■□□□ 1.62
HLA-C-208ENST00000487245 MTERF1Q99551 399 aaKnown RBP25.17■■□□□ 1.62
HLA-C-208ENST00000487245 PITX2Q99697 317 aa25.17■■□□□ 1.62
HLA-C-208ENST00000487245 DGCR6LQ9BY27 220 aa25.17■■□□□ 1.62
HLA-C-208ENST00000487245 CORO2BQ9UQ03 480 aa25.17■■□□□ 1.62
HLA-C-208ENST00000487245 PTGES3LE9PB15 166 aa25.16■■□□□ 1.62
HLA-C-208ENST00000487245 ABCB1P08183 1280 aaPredicted RBP25.16■■□□□ 1.62
HLA-C-208ENST00000487245 FPGSQ05932 587 aa25.16■■□□□ 1.62
HLA-C-208ENST00000487245 POM121L1PQ3SYA9 428 aa25.16■■□□□ 1.62
HLA-C-208ENST00000487245 SPIN4Q56A73 249 aa25.16■■□□□ 1.62
HLA-C-208ENST00000487245 FAHD1Q6P587 224 aa25.16■■□□□ 1.62
HLA-C-208ENST00000487245 C16orf87Q6PH81 154 aa25.16■■□□□ 1.62
HLA-C-208ENST00000487245 ZNF621Q6ZSS3 439 aa25.16■■□□□ 1.62
HLA-C-208ENST00000487245 PHOSPHO2Q8TCD6 241 aa25.16■■□□□ 1.62
HLA-C-208ENST00000487245 CHST8Q9H2A9 424 aa25.16■■□□□ 1.62
HLA-C-208ENST00000487245 RIBC2Q9H4K1 309 aa25.16■■□□□ 1.62
HLA-C-208ENST00000487245 CCNB1IP1Q9NPC3 277 aa25.16■■□□□ 1.62
HLA-C-208ENST00000487245 SCN3BQ9NY72 215 aa25.16■■□□□ 1.62
HLA-C-208ENST00000487245 SCAMP2O15127 329 aaKnown RBP25.15■■□□□ 1.62
HLA-C-208ENST00000487245 SLC16A8O95907 504 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 ITGB7P26010 798 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 MLLT10P55197 1068 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 VLDLRP98155 873 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 LRRC74AQ0VAA2 488 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 DDX39BQ13838 428 aaKnown RBP25.15■■□□□ 1.62
HLA-C-208ENST00000487245 ZNF658BQ4V348 819 aaPredicted RBP25.15■■□□□ 1.62
HLA-C-208ENST00000487245 ANXA8L1Q5VT79 327 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 FBXO46Q6PJ61 603 aaPredicted RBP25.15■■□□□ 1.62
HLA-C-208ENST00000487245 DCDC5Q6ZRR9 648 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 TSPYL5Q86VY4 417 aaPredicted RBP25.15■■□□□ 1.62
HLA-C-208ENST00000487245 HORMAD1Q86X24 394 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 EGFL6Q8IUX8 553 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 RNF175Q8N4F7 328 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 VPS37AQ8NEZ2 397 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 CHTF18Q8WVB6 975 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 HSH2DQ96JZ2 352 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 ZNF347Q96SE7 839 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 EXD2Q9NVH0 621 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 ERVK-11Q9UQG0 969 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 PCDHGA10Q9Y5H3 936 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 C1orf105O95561 183 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 MVKQ03426 396 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 TMEM240Q5SV17 173 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 GALNT5Q7Z7M9 940 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 OR8D1Q8WZ84 308 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 RORBQ92753 470 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 YIPF6Q96EC8 236 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 ZNF514Q96K75 400 aaPredicted RBP25.15■■□□□ 1.62
HLA-C-208ENST00000487245 WRAP53Q9BUR4 548 aaKnown RBP25.15■■□□□ 1.62
HLA-C-208ENST00000487245 DUSP26Q9BV47 211 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 LMCD1Q9NZU5 365 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 GMPPBQ9Y5P6 360 aa25.15■■□□□ 1.62
HLA-C-208ENST00000487245 EDDM13A0A1B0GTR0 161 aa25.14■■□□□ 1.61
HLA-C-208ENST00000487245 SLC22A1O15245 554 aa25.14■■□□□ 1.61
HLA-C-208ENST00000487245 XPNPEP2O43895 674 aa25.14■■□□□ 1.61
HLA-C-208ENST00000487245 SULT1C4O75897 302 aa25.14■■□□□ 1.61
HLA-C-208ENST00000487245 CD6P30203 668 aa25.14■■□□□ 1.61
HLA-C-208ENST00000487245 KCNC4Q03721 635 aa25.14■■□□□ 1.61
HLA-C-208ENST00000487245 CCSMST1Q4G0I0 132 aa25.14■■□□□ 1.61
HLA-C-208ENST00000487245 IQCCQ4KMZ1 466 aa25.14■■□□□ 1.61
HLA-C-208ENST00000487245 SYT6Q5T7P8 510 aaPredicted RBP25.14■■□□□ 1.61
HLA-C-208ENST00000487245 ZNF697Q5TEC3 545 aa25.14■■□□□ 1.61
HLA-C-208ENST00000487245 MED27Q6P2C8 311 aa25.14■■□□□ 1.61
HLA-C-208ENST00000487245 PSRC1Q6PGN9 363 aaPredicted RBP25.14■■□□□ 1.61
HLA-C-208ENST00000487245 LILRA3Q8N6C8 439 aaPredicted RBP25.14■■□□□ 1.61
HLA-C-208ENST00000487245 ZNF366Q8N895 744 aa25.14■■□□□ 1.61
HLA-C-208ENST00000487245 TTC29Q8NA56 475 aaPredicted RBP25.14■■□□□ 1.61
HLA-C-208ENST00000487245 OR7G3Q8NG95 312 aa25.14■■□□□ 1.61
HLA-C-208ENST00000487245 ZNF707Q96C28 371 aaPredicted RBP25.14■■□□□ 1.61
HLA-C-208ENST00000487245 VMP1Q96GC9 406 aa25.14■■□□□ 1.61
HLA-C-208ENST00000487245 LRRC3BQ96PB8 259 aa25.14■■□□□ 1.61
HLA-C-208ENST00000487245 TPT1P8Q9HAU6 139 aa25.14■■□□□ 1.61
HLA-C-208ENST00000487245 NECTIN3Q9NQS3 549 aa25.14■■□□□ 1.61
HLA-C-208ENST00000487245 PDP1Q9P0J1 537 aaPredicted RBP25.14■■□□□ 1.61
HLA-C-208ENST00000487245 PCDH10Q9P2E7 1040 aa25.14■■□□□ 1.61
HLA-C-208ENST00000487245 ERVK-18Q9QC07 812 aa25.14■■□□□ 1.61
HLA-C-208ENST00000487245 ERGIC3Q9Y282 383 aa25.14■■□□□ 1.61
HLA-C-208ENST00000487245 ITM2BQ9Y287 266 aa25.14■■□□□ 1.61
HLA-C-208ENST00000487245 FKBP9O95302 570 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 C1QCP02747 245 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 PBLDP30039 288 aaPredicted RBP25.13■■□□□ 1.61
HLA-C-208ENST00000487245 IRS1P35568 1242 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 HPCAL1P37235 193 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 NPTX1Q15818 432 aa25.13■■□□□ 1.61
HLA-C-208ENST00000487245 SLCO4C1Q6ZQN7 724 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms