RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 PRKAB1Q9Y478 270 aa11.96□□□□□ -0.5
HSPG2-211ENST00000486901 TRBV5-3A0A0A0MS03 114 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 DRGXA6NNA5 263 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 HAT1O14929 419 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 PBLDP30039 288 aaPredicted RBP11.95□□□□□ -0.5
HSPG2-211ENST00000486901 SOAT1P35610 550 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 HNRNPFP52597 415 aaKnown RBP11.95□□□□□ -0.5
HSPG2-211ENST00000486901 CRYBA2P53672 197 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 CACNG1Q06432 222 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 ELP6Q0PNE2 266 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 PROX2Q3B8N5 592 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 SPATS1Q496A3 300 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 DGKKQ5KSL6 1271 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 SPRYD7Q5W111 196 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 TMIGD1Q6UXZ0 262 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 TRIB2Q92519 343 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 ASIC4Q96FT7 647 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 ARHGAP39Q9C0H5 1083 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 P2RY12Q9H244 342 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 TOR4AQ9NXH8 423 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 SPASTQ9UBP0 616 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 RAB23Q9ULC3 237 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 DOCK4Q8N1I0 1966 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 EFCAB10A6NFE3 127 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 M0QX08 132 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 TRBC1P01850 177 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 JUNDP17535 347 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 DGKAP23743 735 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 PAX3P23760 479 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 MAP2K5Q13163 448 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 NFATC2Q13469 925 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 CCSMST1Q4G0I0 132 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 Q5BKY6 102 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 CLLU1OSQ5K130 101 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 RTP2Q5QGT7 225 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 AGAP6Q5VW22 663 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 ARMCX6Q7L4S7 300 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 DEFB128Q7Z7B8 93 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 FAM124AQ86V42 546 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 ZFP41Q8N8Y5 198 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 TRMT61AQ96FX7 289 aaKnown RBP11.95□□□□□ -0.5
HSPG2-211ENST00000486901 AGAP4Q96P64 663 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 MGLLQ99685 303 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 ABCB8Q9NUT2 735 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 DYTNA2CJ06 578 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 SLC35F4A4IF30 521 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 ETHE1O95571 254 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 CD160O95971 181 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 ANXA5P08758 320 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 HLA-EP13747 358 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 BPIP17213 487 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 ATP5C1P36542 298 aaKnown RBP11.95□□□□□ -0.5
HSPG2-211ENST00000486901 CLDN8P56748 225 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 DEFA1P59665 94 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 DEFA3P59666 94 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 PPIGQ13427 754 aaKnown RBP eCLIP11.95□□□□□ -0.51e-7■□□□□ 10.4
HSPG2-211ENST00000486901 SLC46A3Q7Z3Q1 461 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 RTN4RL1Q86UN2 441 aaPredicted RBP11.95□□□□□ -0.5
HSPG2-211ENST00000486901 CALHM3Q86XJ0 350 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 BBS7Q8IWZ6 715 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 APCDD1Q8J025 514 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 DNAJC22Q8N4W6 341 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 COQ8BQ96D53 544 aa11.95□□□□□ -0.5
HSPG2-211ENST00000486901 SDHCQ99643 169 aaPredicted RBP11.95□□□□□ -0.5
HSPG2-211ENST00000486901 H3BQ06 376 aaPredicted RBP11.94□□□□□ -0.5
HSPG2-211ENST00000486901 GPX5O75715 221 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 CCR7P32248 378 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 HTR7P34969 479 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 HNF1BP35680 557 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 RPS19P39019 145 aaKnown RBP11.94□□□□□ -0.5
HSPG2-211ENST00000486901 SLC11A2P49281 568 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 IRF8Q02556 426 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 MAD2L1Q13257 205 aaPredicted RBP11.94□□□□□ -0.5
HSPG2-211ENST00000486901 XKR6Q5GH73 641 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 C10orf62Q5T681 223 aaPredicted RBP11.94□□□□□ -0.5
HSPG2-211ENST00000486901 MMP21Q8N119 569 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 VPS35Q96QK1 796 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 PHOX2BQ99453 314 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 ZNF226Q9NYT6 803 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 PSORS1C1Q9UIG5 152 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 TBC1D24Q9ULP9 559 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 CLCA3PQ9Y6N3 262 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 CLCA1A8K7I4 914 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 C9P02748 559 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 CR2P20023 1033 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 STK19P49842 368 aaPredicted RBP11.94□□□□□ -0.5
HSPG2-211ENST00000486901 SMUG1Q53HV7 270 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 LIPKQ5VXJ0 399 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 ZNF517Q6ZMY9 492 aaPredicted RBP11.94□□□□□ -0.5
HSPG2-211ENST00000486901 SHFQ7M4L6 423 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 C1orf52Q8N6N3 182 aaKnown RBP11.94□□□□□ -0.5
HSPG2-211ENST00000486901 OR6F1Q8NGZ6 308 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 SAMD11Q96NU1 681 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 SLC22A12Q96S37 553 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 P2RY13Q9BPV8 354 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 CLEC4EQ9ULY5 219 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 GLYATL1P3A0A0U1RQE8 302 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 A0A1W2PQ09 198 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 MTMR11A4FU01 709 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 H3BN98 237 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms