RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 ADCK2Q7Z695 626 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 BIVMQ86UB2 503 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 PRIMA1Q86XR5 153 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 PDSS2Q86YH6 399 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 LIX1LQ8IVB5 337 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 SPNS2Q8IVW8 549 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 CLYBLQ8N0X4 340 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 POGLUT1Q8NBL1 392 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 OR52N2Q8NGI0 321 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 C16orf52Q8NHV5 167 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 FAM136AQ96C01 138 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 RMND5BQ96G75 393 aaPredicted RBP10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 FOPNLQ96NB1 174 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 ALPK1Q96QP1 1244 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 CLEC4MQ9H2X3 399 aaPredicted RBP10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 TRIM45Q9H8W5 580 aaPredicted RBP10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 PLSCR2Q9NRY7 297 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 LANCL2Q9NS86 450 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 CATSPERZQ9NTU4 200 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 ABHD10Q9NUJ1 306 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 EFR3BQ9Y2G0 817 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 MRFAP1Q9Y605 127 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 DNAJC13O75165 2243 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 FBN1P35555 2871 aaKnown RBP10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 ZNF860A6NHJ4 632 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 H7BY64 318 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 MYO1CO00159 1063 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 CD3EAPO15446 510 aaKnown RBP10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 PEX1O43933 1283 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 RDH16O75452 317 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 TRHRP34981 398 aaPredicted RBP10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 CTNNA1P35221 906 aaKnown RBP10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 PTPN7P35236 360 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 HLCSP50747 726 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 PNLIPRP1P54315 467 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 OR4D2P58180 307 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 MLF1P58340 268 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 GPR85P60893 370 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 TPM4P67936 248 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 RELAQ04206 551 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 CDH17Q12864 832 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 GBX1Q14549 363 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 P3H1Q32P28 736 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 ANKRD20A4Q4UJ75 823 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 TMEM214Q6NUQ4 689 aaKnown RBP10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 ARHGAP11AQ6P4F7 1023 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 ACAD11Q709F0 780 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 TAOK1Q7L7X3 1001 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 LINC00523Q86TU6 105 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 OR5M3Q8NGP4 307 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 ZCCHC10Q8TBK6 192 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 MAGEC3Q8TD91 643 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 ZNF480Q8WV37 535 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 TMEM125Q96AQ2 219 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 PEX11GQ96HA9 241 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 PRAP1Q96NZ9 151 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 GBP4Q96PP9 640 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 PANX3Q96QZ0 392 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 PKP4Q99569 1192 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 DEFB127Q9H1M4 99 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 SLC24A3Q9HC58 644 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 RASSF1Q9NS23 344 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 PNPLA3Q9NST1 481 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 GALPQ9UBC7 116 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 ANAPC5Q9UJX4 755 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 RIMKLBQ9ULI2 386 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 KLF13Q9Y2Y9 288 aaPredicted RBP10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 PCDHA3Q9Y5H8 950 aa10.18□□□□□ -0.78
SMARCC1-205ENST00000483847 CSPG4Q6UVK1 2322 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 MAGEB17A8MXT2 336 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 E7ENX8 843 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 NPIPA2E9PIF3 369 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 NPIPA3F8WFD2 350 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 SMAPO00193 183 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 KPNA5O15131 536 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 PSMD3O43242 534 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 MFAP3LO75121 409 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 DNAJB6O75190 326 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 NIPSNAP2O75323 286 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 PSIP1O75475 530 aaKnown RBP10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 SLC16A8O95907 504 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 ADRA1DP25100 572 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 PPARGP37231 505 aaPredicted RBP10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 TTPAP49638 278 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 DGKQP52824 942 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 EIF3BP55884 814 aaKnown RBP10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 TAP2Q03519 686 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 TYSND1Q2T9J0 566 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 GXYLT1Q4G148 440 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 ACSBG2Q5FVE4 666 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 AARS2Q5JTZ9 985 aaKnown RBP10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 CAVIN1Q6NZI2 390 aaKnown RBP10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 ARSKQ6UWY0 536 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 MDGA2Q7Z553 956 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 PCGF5Q86SE9 256 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 CDC20BQ86Y33 519 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 LRRC56Q8IYG6 542 aaPredicted RBP10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 ZFP62Q8NB50 900 aaPredicted RBP10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 KCT2Q8NC54 265 aa10.17□□□□□ -0.78
SMARCC1-205ENST00000483847 PLPP5Q8NEB5 264 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms