RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 GABRR3A8MPY1 467 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 SCAMP2O15127 329 aaKnown RBP13.46□□□□□ -0.25
CLK3-204ENST00000483723 DFNA5O60443 496 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 NDUFS2O75306 463 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 SH3BGRLO75368 114 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 CLEC3AO75596 197 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 LRATO95237 230 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 CCNDBP1O95273 360 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 CHRM5P08912 532 aaPredicted RBP13.46□□□□□ -0.25
CLK3-204ENST00000483723 KIR3DL1P43629 444 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 TRPC1P48995 793 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 WLSQ5T9L3 541 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 IRAK1BP1Q5VVH5 260 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 KHDRBS2Q5VWX1 349 aaKnown RBP13.46□□□□□ -0.25
CLK3-204ENST00000483723 ZNF425Q6IV72 752 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 LCN8Q6JVE9 175 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 DHFR2Q86XF0 187 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 ADGRF3Q8IZF5 1079 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 GOLM1Q8NBJ4 401 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 GPR156Q8NFN8 814 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 OR7A2PQ8NGA2 310 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 WDR48Q8TAF3 677 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 LCN9Q8WX39 176 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 SLC6A18Q96N87 628 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 ALG2Q9H553 416 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 CAAP1Q9H8G2 361 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 SLC6A20Q9NP91 592 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 MRPS30Q9NP92 439 aaKnown RBP13.46□□□□□ -0.25
CLK3-204ENST00000483723 FAM120CQ9NX05 1096 aaKnown RBP13.46□□□□□ -0.25
CLK3-204ENST00000483723 TAAR2Q9P1P5 351 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 BTBD3Q9Y2F9 522 aa13.46□□□□□ -0.25
CLK3-204ENST00000483723 PRSS51A0A1B0GVH4 220 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 AQP12BA6NM10 295 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 BTN3A3O00478 584 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 DLL1O00548 723 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 AKAP10O43572 662 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 GSTM2P28161 218 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 VHLP40337 213 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 BLKP51451 505 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 ZNF763Q0D2J5 394 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 SELPLGQ14242 412 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 ZIC1Q15915 447 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 PGS1Q32NB8 556 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 OR4F3Q6IEY1 312 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 FAM71E1Q6IPT2 247 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 MAMSTRQ6ZN01 415 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 LRRC74BQ6ZQY2 392 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 IQCHQ86VS3 1027 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 AQP12AQ8IXF9 295 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 PHACTR4Q8IZ21 702 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 TTLQ8NG68 377 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 OR4E2Q8NGC2 313 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 FLVCR1-AS1Q8TAF5 88 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 CREB3L4Q8TEY5 395 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 C16orf78Q8WTQ4 265 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 SH3GL1Q99961 368 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 ZNF717Q9BY31 904 aaPredicted RBP13.45□□□□□ -0.26
CLK3-204ENST00000483723 TRIM8Q9BZR9 551 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 REXO4Q9GZR2 422 aaKnown RBP13.45□□□□□ -0.26
CLK3-204ENST00000483723 MYNNQ9NPC7 610 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 WBP11Q9Y2W2 641 aaKnown RBP13.45□□□□□ -0.26
CLK3-204ENST00000483723 LRRC42Q9Y546 428 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 PCDHB3Q9Y5E6 796 aa13.45□□□□□ -0.26
CLK3-204ENST00000483723 ARHGEF17Q96PE2 2063 aaPredicted RBP13.45□□□□□ -0.26
CLK3-204ENST00000483723 KIR2DS5A0A0G2JLQ3 304 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 A0A0G2JNG1 304 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 FEZF1A0PJY2 475 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 KIR2DS3K7RE56 304 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 CASQ2O14958 399 aaPredicted RBP13.44□□□□□ -0.26
CLK3-204ENST00000483723 OR1F1O43749 312 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 BAG2O95816 211 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 WNT1P04628 370 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 PIM1P11309 404 aaPredicted RBP13.44□□□□□ -0.26
CLK3-204ENST00000483723 COX7A2P14406 83 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 CMPK1P30085 196 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 BSGP35613 385 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 AHRP35869 848 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 PXNP49023 591 aaPredicted RBP13.44□□□□□ -0.26
CLK3-204ENST00000483723 UBE2IP63279 158 aaKnown RBP13.44□□□□□ -0.26
CLK3-204ENST00000483723 MRPS22P82650 360 aaKnown RBP13.44□□□□□ -0.26
CLK3-204ENST00000483723 PDE7AQ13946 482 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 KIR2DS5Q14953 304 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 SPATA24Q86W54 205 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 PARGQ86W56 976 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 FBXL6Q8N531 539 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 GFM2Q969S9 779 aaKnown RBP13.44□□□□□ -0.26
CLK3-204ENST00000483723 ZNF583Q96ND8 569 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 PHF12Q96QT6 1004 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 INPP5KQ9BT40 448 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 IER2Q9BTL4 223 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 REEP4Q9H6H4 257 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 SLC6A13Q9NSD5 602 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 POT1Q9NUX5 634 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 SNX7Q9UNH6 387 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 ERVK-11Q9UQG0 969 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 PCDHB14Q9Y5E9 798 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 GMEB1Q9Y692 573 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 CEP192Q8TEP8 1941 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 TRBV23OR9-2A0A075B6M9 112 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 GNG14A0A1W2PPG7 69 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms